Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001353.1 Length=424 Score E Sequences producing significant alignments: (Bits) Value seq231 322 1e-85 seq9012 87.8 5e-15 >seq231 Length=40023 Score = 322 bits (356), Expect = 1e-85 Identities = 333/424 (79%), Gaps = 9/424 (2%) Strand=Plus/Minus Query 1 GCGCGCCAACGCGGTTTGCCATTCGCCCTACGCGGTTCAACGTCATTCGCTCACTCAGGC 60 |||||||| | || ||||| || |||||| ||||| || || ||| || | | ||||| Sbjct 31284 GCGCGCCAGCAGGGCTTGCCGTT-GCCCTATGCGGT-CAGTGTGATT-GC-CGCGCAGGC 31229 Query 61 CGGGCCGGTAACGACGTTCGGCCGGCCCGGCGCTCGCCGGCCGAGCTCGCTGCCCGCCAT 120 || |||||| | ||| | |||| |||| ||| || | |||||||| | ||||| ||| Sbjct 31228 CGAGCCGGTGATGACCT-CGGCGGGCCTGGCCCTGGT-GGCCGAGC-CACTGCC-GCCTG 31173 Query 121 TCGACCAGCCCCGCGACACGCCGGTGATCGCCGGTGGCTGGGGTGTGTACGGTGTTTGCC 180 ||| || ||||||| | |||||| ||||| |||||||| |||||||| | ||| Sbjct 31172 CCGATGCTCCGTGCGACACACTGGTGATTGCCGGCGGCTGGGGGGTGTACGGCGCC-GCC 31114 Query 181 GAGGACCCGACGCTGGTGCAATGGGTGCGTGATAAATCCCTGCACACCCGGCGCATGGCC 240 || |||||| |||||||| | ||||| || | ||| || || ||||||||||| || Sbjct 31113 GAAGACCCGGCGCTGGTGGACTGGGTTCGGCAAAAAGCCACCCAGGCCCGGCGCATGACC 31054 Query 241 TCGGTCTGCACCGGGGCTTTTCTGCTGGCCGCCAGTGGTCTGCTTGATGGTTGCCGCGTG 300 ||||| || ||||| || ||||||||||||||||| ||| |||| || || |||||||| Sbjct 31053 TCGGTGTGTACCGGCGCCTTTCTGCTGGCCGCCAGCGGTTTGCTCGACGGCCGCCGCGTG 30994 Query 301 GCCACGCACTGGACGCGCTGTGAAGAACTGGCGCGCAAGTTCCCTGCACTCACGGTGGAG 360 | || |||||||||||||| |||||||| |||||||||| ||| || ||||||||| Sbjct 30993 GTGACCCACTGGACGCGCTGCGAAGAACTCGCGCGCAAGTACCCACAGCTGACGGTGGAG 30934 Query 361 GCCAATCCGATTTTCATCCAGCAGGGCGCGGTGTGGACGTCTGCTGGCGTGACCGCCGGG 420 ||||||||||||||||||||||||||| ||||||| || || |||||||||||||| Sbjct 30933 GCCAATCCGATTTTCATCCAGCAGGGCAACCTGTGGACCTCCGCCGGCGTGACCGCCGGT 30874 Query 421 ATCG 424 |||| Sbjct 30873 ATCG 30870 >seq9012 Length=606 Score = 87.8 bits (96), Expect = 5e-15 Identities = 136/190 (72%), Gaps = 6/190 (3%) Strand=Plus/Plus Query 238 GCCTCGGTCTGCACCGGGGCTTTTCTGCTGGCCGCCAGTGGTCTGCTTGATGGTTGCCGC 297 |||| | |||| |||||| | || | ||||| || ||||| ||||| || || ||||| Sbjct 170 GCCTAGATCTGTACCGGGACATTCATCCTGGCGGCGAGTGGACTGCTCGACGGACGCCGC 229 Query 298 GTGGCCACGCACTGG--ACGCGCTGTGAAGAACTGGCGCGCAAGTTCCCTGCAC-TCACG 354 | | ||||| ||| || | | | | | ||||||||| | || ||| ||||| Sbjct 230 GCAACGACGCATTGGCAACACACGGCAACG--CTGGCGCGCGCCTATCC-GCAGATCACG 286 Query 355 GTGGAGGCCAATCCGATTTTCATCCAGCAGGGCGCGGTGTGGACGTCTGCTGGCGTGACC 414 || | || | | |||||||||||| | ||| |||||| ||||||| || |||||| Sbjct 287 GTAGTTCCCGACGCCATTTTCATCCAGGACGGCACGGTGTTCTCGTCTGCGGGTGTGACC 346 Query 415 GCCGGGATCG 424 |||||||||| Sbjct 347 GCCGGGATCG 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1254224321280