Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq64 192 4e-47 seq161 84.2 2e-14 >seq64 Length=166748 Score = 192 bits (212), Expect = 4e-47 Identities = 133/151 (88%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 1 CGAAAATTGCTGAAGATGCCATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTAT 60 |||| || |||||||| ||||||||| | || || |||||||||||||| |||||||| Sbjct 69146 CGAAGATCGCTGAAGACGCCATCGCCAACGTACGTGCCCAGGTCGGCACCGACAACGTCC 69087 Query 61 TGCTTGGCCTGTCCGGCGGCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCA 120 |||| |||||||||||||||||||||||||| || || ||||| |||||||||||||||| Sbjct 69086 TGCTGGGCCTGTCCGGCGGCGTTGACTCCTCCGTGGTTGCGGCGCTGCTGCACAAGGCCA 69027 Query 121 TCGGCGACCAACTGACCTGCGTGTTTGTCGA 151 ||||||||||||||||||| || || ||||| Sbjct 69026 TCGGCGACCAACTGACCTGTGTCTTCGTCGA 68996 >seq161 Length=88799 Score = 84.2 bits (92), Expect = 2e-14 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33 CGCGCCCAGGTCGGCACTGACAACGTATTGCTTGGCCTGTCCGGCGGCGTTGACTCCTCG 92 ||||| || || |||| || | || | || ||||||||||||||||| || || || Sbjct 47002 CGCGCGCAAGTGGGCAAGGATGAAGTCATCCTGGGCCTGTCCGGCGGCGTCGATTCGTCC 46943 Query 93 GTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCTGCGTGTTTGTCGA 151 || | || || ||| | ||| |||||||||||||| ||||||||||| || ||||| Sbjct 46942 GTGGCCGCTGCCCTGATCCACCGCGCCATCGGCGACCAGCTGACCTGCGTCTTCGTCGA 46884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383947901400