Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001416.1 Length=341 Score E Sequences producing significant alignments: (Bits) Value seq339 533 3e-149 seq1636 145 2e-32 >seq339 Length=192476 Score = 533 bits (590), Expect = 3e-149 Identities = 323/340 (95%), Gaps = 1/340 (0%) Strand=Plus/Minus Query 1 CGACTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGAT 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 161027 CGACTTGAGCTTGCTGGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGAT 160968 Query 61 GGTGGCGACAAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCC 120 ||||||||| |||||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct 160967 GGTGGCGACGAACGCCACGGCAATCCCGCTGCCCAGTTGCGACGGATCGGCCAGGTTGCC 160908 Query 121 CATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCC 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 160907 CATCACGTGGATCAAGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCC 160848 Query 181 CATGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCCA 240 ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||| Sbjct 160847 CATGCTTTCAAAGACTTTGGCAGCGTTGATGTCGCGGCTTTCCTGGGT-GTAGAAGTCCA 160789 Query 241 CTTCCCGAAGTCTGCGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCTT 300 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 160788 CTTCGAGGATGCTGCGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCTT 160729 Query 301 TGCGCGCGTAGCTGTCGGGCTCGGCATCGGCCACGCCTTC 340 |||| ||||||||||||||||||||||||||||||||||| Sbjct 160728 TGCGGGCGTAGCTGTCGGGCTCGGCATCGGCCACGCCTTC 160689 >seq1636 Length=29650 Score = 145 bits (160), Expect = 2e-32 Identities = 141/179 (79%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 4 CTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGATGGT 63 |||||||||| ||||||| |||| |||| |||||||||| | | ||||| || || || Sbjct 23224 CTTGAGCTTGTTCGCCACGGGCAGGAACAGCAGGTTGGCAAGGCCGACGCCATAAATCGT 23165 Query 64 GGCGACAAACGCCACGGCAATGCCGCTGCCCAG-TTGCGAAGGGTCGGCGAGGTTGCCCA 122 | ||| || || ||||| |||||||| ||||| |||| || |||| |||||| ||| Sbjct 23164 CGAGACGAAGGCGACGGCGATGCCGCTACCCAGCTTGCTC-GGATCGGTGAGGTTTTCCA 23106 Query 123 TCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCCC 181 | |||||||||| ||||| ||| || || | |||||||||||| |||| |||||| || Sbjct 23105 TGACGTGGATCAAGCCCAGCACGGCGCCCAGGATGCCGATGGTGGGCGAATAGCCGGCC 23047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988661518560