Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq29 280 2e-73 >seq29 Length=371730 Score = 280 bits (310), Expect = 2e-73 Identities = 181/198 (91%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 1 CGACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 60 |||| || ||||| ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 163816 CGACTTTCTTGCTGGCCTTCAGGCGACGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 163757 Query 61 CCAGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAG 120 ||||||||| ||| || || ||||||||||||||||||||||| ||||||||||| || | Sbjct 163756 CCAGGCCCAATTCAGGGTGTTCGTTGAGCCACAGGCTGAAGGCATCCTTGACCACCCCGG 163697 Query 121 AGACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCG 180 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 163696 AGACGAACGCCGCTGCCTCACGGGACGACAGGCGCTCCTTGGTCTGGCCGGAGAATTGCG 163637 Query 181 GTTCCTGCATCTTCATCG 198 | |||||||| ||||||| Sbjct 163636 GCTCCTGCATTTTCATCG 163619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534327496115