Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001445.1 Length=285 Score E Sequences producing significant alignments: (Bits) Value seq339 309 5e-82 >seq339 Length=192476 Score = 309 bits (342), Expect = 5e-82 Identities = 236/283 (83%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 3 AGCTGGTGGGCTCGCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCG 62 |||||||||| || |||||||| |||||||| || ||||||||||||||||||| |||| Sbjct 146873 AGCTGGTGGGTTCACGCGCCCTTGGCCCGCGGGACAGGCTGGTGCTGGTGCAGGTCGGCG 146932 Query 63 AGGAGCAGATCCTGCTCGGCATCACCCCCGGCCGCATCACCCCGCTGCATGTACTCAAGA 122 | |||||||||||||| |||||||||||||| |||||||||||| |||| || |||||| Sbjct 146933 ACGAGCAGATCCTGCTGGGCATCACCCCCGGTCGCATCACCCCGTTGCACGTGCTCAAGT 146992 Query 123 CCCCGGTGGACGCGGTCAAGACCGAAGCCGCCACGCNNNNNNNNNNNNAGCGCCTGATGG 182 | || ||||| | || | ||||| |||| ||||||| ||||||| |||| Sbjct 146993 CGCCTGTGGAAGTGGCCCAGACCCAAGCGGCCACGCCGGAATTCGCCCAGCGCCTCATGG 147052 Query 183 AGTTGCTGGGCAAGGATCAAAAGGATAAGAAGTAATGCGCGTTTTGTTGACGCTCATGCT 242 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 147053 AGTTGCTGGGCAAGGATCAGAAGGATAAGAAGTAATGCGCGTTTTATTGACGCTCATGCT 147112 Query 243 GTTGCTGGCCGCACCGATGGCCCTGGGCGCCGACCCGTTGTCG 285 ||||||||| || ||| |||| | || |||||||||||| Sbjct 147113 GTTGCTGGCAGCGCCGCTGGCGTACGCAGCAGACCCGTTGTCG 147155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 812689724630