Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq224 417 2e-114 seq1154 149 1e-33 >seq224 Length=95911 Score = 417 bits (462), Expect = 2e-114 Identities = 308/359 (86%), Gaps = 0/359 (0%) Strand=Plus/Plus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 |||| || || ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 68029 CGAACTTGGGTTCCTGGCGCAAGGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 68088 Query 61 ACATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGC 120 |||||||||| || ||||||||||| || |||||||||||||||||||||||||| |||| Sbjct 68089 ACATGTAGCAGACATAACCGCTGCAGAAGCCGCAGAAGTTGCACGGGCCCATCTGGGCGC 68148 Query 121 CATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAAC 180 | || |||||||||||||||||||| ||||| || || |||||||||||||| ||||| | Sbjct 68149 CGTAAGGGTTGGTGTACGGCCCCGATGTATTCGCGGAAGGCAGGTTGTAGGGCTTGTACC 68208 Query 181 CGACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCA 240 | || | | ||||| ||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct 68209 CCACGGCCGTGGCGGCCTTCTGGAACAGCTGTGCGGAGACTGTGTTCTTCTGCGATTCCA 68268 Query 241 AGGGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACCA 300 ||||| | |||||||| ||||| || || |||||||| || ||||||||||||| Sbjct 68269 GCGGGAAGTGATTGGAGCGATCCGGTGCGTAAGGGTTGCCGCCCTTGCCTTCGCCCACCA 68328 Query 301 ACTGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTCG 359 |||| ||||| || |||||||| || |||||||||||||||||||| || || |||||| Sbjct 68329 ACTGACCTTTCACCGTCCAGGCTTGCCCGGAGGTGCCGAAGACTTTCTCGGCATAGTCG 68387 >seq1154 Length=69017 Score = 149 bits (164), Expect = 1e-33 Identities = 147/187 (79%), Gaps = 6/187 (3%) Strand=Plus/Plus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 ||||||| | |||| |||||| ||||||| |||||| ||||| ||||| |||||||||| Sbjct 11460 CGAAGTTGGCCACCATGCGCAGGGCCGGCATGATGTTGACGTTGGGCGACGCCTTGGAAT 11519 Query 61 ACATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGC 120 | ||||||| |||| ||| ||| |||||||||||||||||||| |||||||| || Sbjct 11520 AGTTGTAGCAGGCGTAGCCGGAGCAGAAACCGCAGAAGTTGCACGGTCCCATCTGGCAGC 11579 Query 121 CATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTT---GTAGGGTTTGT 177 | || ||||| |||||||| || |||| || | ||| ||| ||| | |||| | || Sbjct 11580 CGTACGGGTTCGTGTACGGACCGGAGGCGTTCGACGA-GGC--GTTGACGAAGGGGTGGT 11636 Query 178 AACCGAC 184 | ||||| Sbjct 11637 AGCCGAC 11643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046253451680