Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001603.1 Length=479 Score E Sequences producing significant alignments: (Bits) Value seq339 706 0.0 >seq339 Length=192476 Score = 706 bits (782), Expect = 0.0 Identities = 443/476 (93%), Gaps = 1/476 (0%) Strand=Plus/Minus Query 3 AGGTAGTTGCCGCCGATGATGGCGACAAACGCCATGATGATGCCGATCAGGCTCAACACA 62 ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||| Sbjct 160465 AGGTAGTTGCCGCCGATAATCGCGACAAACGCCATGATGATGCCAATCAGGCTCAATACA 160406 Query 63 TCCATTAGAGGCAGGCCTCCACCAGATGCTTGCCGATGTCGTCCAGGCTGTAGATGGCGT 122 ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 160405 TCCATCAGAGGCAAGCCTCCACCAGGTGCTTGCCGATGTCGTCCAGGCTGTAGACGGCGT 160346 Query 123 CGGCCAGGTCAGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTCGT 182 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 160345 CGGCCAGGTCGGCCTTGACGATGGCCATGGGCATGCCATAGATCACGCAGCTGGCTTCAT 160286 Query 183 CCTGGGCCCAGATCACACTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACGGCCGTCGG 242 |||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| Sbjct 160285 CCTGGGCCCAGATCGCGCTGCCGCCCTGCTTGAGCAGGCGCGCGCCTTCACGGCCATCGG 160226 Query 243 CGCCCATGCTCGGTGAGGACCACCGCCAGAACTTTGTCGCCGTAGGACTTGGCGGCCGAA 302 ||||||||| |||| | |||||||||| |||||||||||||||||| ||||| || || Sbjct 160225 CGCCCATGC-CGGTCAACACCACCGCCAAAACTTTGTCGCCGTAGGATTTGGCCGCAGAC 160167 Query 303 CCGAAGGTGATGTCCACGCACGGCTTGTAGTTCAGGCGTTCATCCCCCGGCAGGATTTTG 362 ||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct 160166 CCGAAGGTGATATCCACACACGGCTTGTAGTTCAGGCGTTCGTCGCCCGGCAGGATTTTG 160107 Query 363 ATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACCCGGGGCCAGCAGCGCCAGGCCA 422 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct 160106 ATCGCACCACGGCCATCGACCATCATCTGCTTGCCACCGGGGGCCAGCAGCGCCAGACCC 160047 Query 423 GGGCGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGATTGTC 478 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 160046 GGACGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTC 159991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1430199672480