Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001616.1 Length=254 Score E Sequences producing significant alignments: (Bits) Value seq356 315 1e-83 >seq356 Length=50182 Score = 315 bits (348), Expect = 1e-83 Identities = 222/254 (87%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 1 CGAACACATGGTTGAGCAGAAAATCGCGGCTCAGCGGGCGGTTCGGGTGCTGCAAGAGCA 60 ||||||| |||||||||| ||| |||||||||||||| ||||| || |||||||| | || Sbjct 31855 CGAACACGTGGTTGAGCAAAAAGTCGCGGCTCAGCGGCCGGTTGGGATGCTGCAACAACA 31914 Query 61 GGCGCAGCGCGCGGTAATCCGAATTGCCCAGGCTGACCACCACACCGTCCGGCGAAAGCA 120 |||||| | | |||||||| || ||||| |||||||||||||| || ||||||||||||| Sbjct 31915 GGCGCAACACCCGGTAATCGGAGTTGCCGAGGCTGACCACCACGCCTTCCGGCGAAAGCA 31974 Query 121 ATTGGCGCGCCCGGGTGTCGAGTTGCCAGCCGGCGAAACGGATGCTCGGCGCTTCATCCA 180 ||||||| ||||||||||| || ||||||||||| || | ||||||||| |||||||| | Sbjct 31975 ATTGGCGGGCCCGGGTGTCCAGCTGCCAGCCGGCAAAGCTGATGCTCGGTGCTTCATCGA 32034 Query 181 GTCGCGCCCGGTCGGGACAACTCTGCACCCGGCGCAATACCACCTTGATCCGCACCAACA 240 | ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| || Sbjct 32035 GCCGCGCCCGGTCCGGAAAACTCTGCACCCGGCGCAGCACCACCTTGATCCGCACCAGCA 32094 Query 241 GTTCCCGCGGGTCG 254 |||||||||||| Sbjct 32095 ACTCCCGCGGGTCG 32108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 713503183435