Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq45 367 3e-99 >seq45 Length=185997 Score = 367 bits (406), Expect = 3e-99 Identities = 242/268 (90%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 3 GACGAACTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGACTAC 62 ||||| ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||| Sbjct 160758 GACGAGCTGGCGCCGCACCATCTGAAGGTGCCGTCGGGCTCGTCGGTGCGGCTGGACTAC 160817 Query 63 AGCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACA 122 ||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||| || Sbjct 160818 AGCGAGCAGCCGCCGATTCTGGCGGTGCGCTTGCAGGAATTGTTCGGGCTGGCGGATACG 160877 Query 123 CCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGG 182 ||||| |||||||||||||| |||||||||||| |||||||| |||| ||| | | || Sbjct 160878 CCGCGGATTGCCGGCGGGCGGCAGGTGGTCAAGCTGCACCTGTTGTCACCGGCCAGACGG 160937 Query 183 CCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAG 242 || ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 160938 CCCGTGCAGGTGACGCAGGACCTGGCGAACTTCTGGCGCAGTACTTACGCCGAGGTGAAG 160997 Query 243 AAGGATCTGAAGGGGCGGTATCCGAAGC 270 |||||| ||||||||||||||||||||| Sbjct 160998 AAGGATTTGAAGGGGCGGTATCCGAAGC 161025 Score = 75.2 bits (82), Expect = 2e-11 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 267 AAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAAGCGACGGCGCGGATCAAACCCCGT 326 |||||||| |||||||||||||||||| | || ||| |||| || |||||||| || | Sbjct 169998 AAGCATTACTGGCCGGATGATCCGTTGATTGCTGAACCGACTGCCCGGATCAAGCCGAGA 170057 Query 327 AAGTAGCAACGACGGAGATCAACTGTGGG 355 ||||| || || ||||| | |||||| Sbjct 170058 AAGTAAGTACATCGCAGATCTAATGTGGG 170086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033455244320