Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001671.1 Length=306 Score E Sequences producing significant alignments: (Bits) Value seq360 381 1e-103 >seq360 Length=31455 Score = 381 bits (422), Expect = 1e-103 Identities = 268/306 (88%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 1 CGAGGGTCTCAAGCGCGACCACCTGCTGGGCACCACCACCTGCGTCAAGGTGGAGCTCTA 60 |||||| || ||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 3694 CGAGGGACTGAAGCGCGACAACCTGCTGGGCGCCACCACCTGCGTCAAGGTGGAGCTCTA 3635 Query 61 TGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTGCTGGGCCT 120 |||||| | |||||||| ||||||||||||||||| ||||||||| | ||||||||||| Sbjct 3634 TGGCTCACTCGGCGCCACCGGCAAAGGCCACGGCAGTGACAAGGCCGTATTGCTGGGCCT 3575 Query 121 GGAAGGCGAACACCCCGACACCGTGAATACCGAAACCGTGGCTGCCCGCCTGGCGCAGAT 180 ||||||||| ||||| ||||||||||| ||||||||||| || ||||||||| | | || Sbjct 3574 GGAAGGCGAGCACCCGGACACCGTGAACACCGAAACCGTTGCCGCCCGCCTGTTGGAAAT 3515 Query 181 GCGCAAGGACGGCCGCCTGAATTTGCTCGGTGAACACAGCATTGCGTTCAACGAGAAAGA 240 ||| ||| ||| |||| ||||||| ||||||||||||||||||||||||||||| Sbjct 3514 TCGCGGCAACGCACGCTTGAACCTGCTCGGCGAACACAGCATTGCGTTCAACGAGAAAGA 3455 Query 241 ACACCTGGCGATGATCCGCAAACCCCTCGCCTACCATCCCAACGGCATGATCTTTCGTGC 300 ||||||||||||||| ||||||||||| |||| |||||||||||||||||||| || || Sbjct 3454 ACACCTGGCGATGATTCGCAAACCCCTGCCCTATCATCCCAACGGCATGATCTTCCGCGC 3395 Query 301 TTTCGA 306 ||||| Sbjct 3394 CTTCGA 3389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 876677204160