Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq1161 372 5e-101 seq2063 73.4 7e-11 >seq1161 Length=18664 Score = 372 bits (412), Expect = 5e-101 Identities = 266/306 (87%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 1 CGAGCTGGATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGC 60 ||||||||| || || |||||||||||||||||||||||||||| || ||||||||||| Sbjct 5540 CGAGCTGGACAACGTGGTGGAAATCGCCGTTGAAGACGAAGAGATCGTGCAGCGTATTGC 5481 Query 61 TGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAA 120 || ||||| || || || |||||||||||||| ||||||| ||||||||| ||||| || Sbjct 5480 CGGTCGTCGTGTTCACGAGGCCTCGGGCCGCGTCTACCACATCGTCTACAACCCGCCGAA 5421 Query 121 GGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGA 180 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct 5420 AGTCGCGGGCAAGGACGATGTCACCGGCGAAGACCTGGTGCAGCGTAAGGACGACACCGA 5361 Query 181 AGAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTT 240 ||| ||||| ||||| |||||||| || |||||||| || |||||||||||||||||||| Sbjct 5360 AGAGACCGTGCGTCATCGCCTGTCGGTCTACCATTCCCAGACCAAGCCGCTGGTGGACTT 5301 Query 241 CTACCAGAAGCTGGCTGCTGCCCAGGGCAAGCCCAAGTACAGCCACGTTGAAGGCGTTGG 300 ||||||||| || | || |||||||||||||| |||||||||||| | ||||| || || Sbjct 5300 CTACCAGAAACTCTCGGCCGCCCAGGGCAAGCCGAAGTACAGCCACATCGAAGGTGTGGG 5241 Query 301 CTCGGT 306 ||||| Sbjct 5240 TTCGGT 5235 >seq2063 Length=17490 Score = 73.4 bits (80), Expect = 7e-11 Identities = 156/233 (67%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 12 ACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCG 71 || |||||||||||| ||| |||||| ||| || | || || | ||||| ||| Sbjct 2671 ACGTGCTGGAAATCGACGTGCCTGACGAATCGATCATCGAACGCATGGACGGCCGCCGCA 2612 Query 72 TACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCA 131 || | |||||||||||| |||||| | | ||| ||||| ||||| | ||| Sbjct 2611 GCCACCCTGGCTCGGGCCGCGTCTACCACGTCAAGTTCAACCCGCCCAAGGTCGACGGCG 2552 Query 132 AGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTC 191 ||||| | |||||||| ||| | |||||| | ||||||| | ||||| || Sbjct 2551 TCGACGACATCACCGGCGAGCCGCTGATCCAGCGCGACGACGACAAGGCCGAAACGGTGA 2492 Query 192 GTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCTAC 244 | |||||| || ||||| || |||||| ||| ||| || |||| Sbjct 2491 AAAAGCGCCTGGACGTGTACCACAACCAGACCAAGGTCCTGCTGGGCTACTAC 2439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899074067040