Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq329 731 0.0 seq905 230 6e-58 >seq329 Length=155757 Score = 731 bits (810), Expect = 0.0 Identities = 434/453 (96%), Gaps = 0/453 (0%) Strand=Plus/Minus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 103547 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGACTCACGGATGGCACGACGTTCC 103488 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103487 ACCTGGGTGGATTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 103428 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 103427 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTTTCGCAGACACTGAAGTCAGCA 103368 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242 |||||||| || ||||||||||||||||||||||| ||||| ||||| ||||| | |||| Sbjct 103367 ATCACGCCATCCTTCATCGGACGAATGGCAGCAATGTTGCCCGGTGTTCGGCCCAACATG 103308 Query 243 CGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCC 302 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 103307 CGCTTGGCCTCGGTGCCAACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCC 103248 Query 303 ACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCA 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103247 ACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCA 103188 Query 363 GTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGG 422 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103187 GTGCCCAGGTCGATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGA 103128 Query 423 AAAGGACCCTAAGCAACGCGTGGGTAAAAAAGT 455 || |||||||| ||||||||||||||||||||| Sbjct 103127 AAGGGACCCTAGGCAACGCGTGGGTAAAAAAGT 103095 >seq905 Length=50795 Score = 230 bits (254), Expect = 6e-58 Identities = 292/400 (73%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||||||| |||| | ||| |||||||||||||||||||| ||||| || || |||| Sbjct 21423 CGATCAGGTACACCTGCGAGGCGCCGGCGCCAAGGGCCGATTCGCGGATCGCGCGGCGCT 21482 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | |||||||| || |||||| |||||||| | | || || || | | ||| Sbjct 21483 CGACCTGGGTCGAACCGCACGGCACGCAGATGATGATGCGCGGCGAAGGACGGAAGAATT 21542 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 | ||||| ||| || |||||| | || ||||||| |||| ||| ||||||||| Sbjct 21543 TCGAGTCGTGCACCATGCGGATGAATTGCTTGAGCATCTGCTCGGTCACGGTGAAGTCGG 21602 Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240 |||||||||| ||||||||||||||||| || | |||||||| || ||| |||| Sbjct 21603 CGATCACGCCATCTTTCATCGGACGAATCGCTTCGATATTGCCCGGCACCTTGCCCAGCA 21662 Query 241 TGCGCTTGGCCTCGGTGCCGACGGC---AACG--ACACTT----TTCTGATTACCATGGG 291 | ||||||| || ||||||| || || | ||| ||| || || | Sbjct 21663 TCTGCTTGGCTTCCTTGCCGACTGCCTGAATGGTCTTCTTGCCATTCGGACCGCCTTCCT 21722 Query 292 TCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAA 351 || ||||| || || || ||||| | ||||||||||||| | ||||||| ||||||| Sbjct 21723 GGCGGATGGCGACGACGGACGGCTCGTCCAGGACGATACCGAGGCCGCGCACATAAATAA 21782 Query 352 GGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGA 391 |||||||||| ||||||| |||||||| |||||| |||| Sbjct 21783 GGGTGTTGGCCGTGCCCAAGTCAATGGCCAGATCGGTGGA 21822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353410428320