Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001720.1 Length=447 Score E Sequences producing significant alignments: (Bits) Value seq76 551 1e-154 >seq76 Length=87738 Score = 551 bits (610), Expect = 1e-154 Identities = 370/413 (90%), Gaps = 0/413 (0%) Strand=Plus/Plus Query 35 CGCTATCTCAACCAGCAGGGGCGCGATGTGGTGAACAGCAACGCCAAGGCCCACAGCATT 94 ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 33175 CGCTACCTCAACCAGCAGGGGCGGGATGTGGTGAACAGCAATAACAAGGCCCACAGCATC 33234 Query 95 CGCGATTGGGGCCAGGGGTTCGAGTTCAACTTCAAGTCCGGTTACACCGCAGGGCCGGTG 154 || |||||||||||||| || |||||||||||||||||||| ||||||| ||||||||| Sbjct 33235 CGTGATTGGGGCCAGGGTTTTGAGTTCAACTTCAAGTCCGGCTACACCGATGGGCCGGTG 33294 Query 155 GGTTTTGGCCTCGACTTGCAGGCGTTCTACGGGTTGAAGCTGGATTCCGGAGGCGACCTC 214 || |||||||| ||| |||||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct 33295 GGCTTTGGCCTGGACCTGCAGGCGTTCTACGGTTTGAAACTGGACTCCGGCGGCGACCTC 33354 Query 215 AACGACAAGGACCACCAGAGCCGTTACCCCGGCAGCATGTTCCCGCTGGACAACGGCAAA 274 || |||||||| |||||| |||| |||||||||||||||||||||||||| |||||||| Sbjct 33355 AATGACAAGGATCACCAGGGCCGCTACCCCGGCAGCATGTTCCCGCTGGATAACGGCAAG 33414 Query 275 TCCGCCGACCAGTTCGGCGTGCTCAGCCCGACGTTCAAGATGCGCTTCGCCAAAGATGAG 334 || ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| Sbjct 33415 TCGGCCGACCAGTTCGGCGTGCTCAGCCCGACCTTCAAGATGCGCTTCGCCCAGGATGAA 33474 Query 335 CTGCGTGTGGGCACGCTGTACGGCAACAACCCGGTGCTGGCCAACACCGACGGCCGCCTG 394 |||| || || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33475 TTGCGCGTCGGTACGCTGTACGGCAACAACCCGGTGCTGGCCAACACCGACGGCCGCCTG 33534 Query 395 TACCAGCAGACCAATACCGGGGTGCAACTGGTGTCCAGGGACCTCAGCGACTT 447 |||||||||||||| ||||| ||||| |||| |||| |||| | | |||||| Sbjct 33535 TACCAGCAGACCAACACCGGCGTGCAGTTGGTTTCCAAGGACTTGACCGACTT 33587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1327814013600