Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001721.1 Length=387 Score E Sequences producing significant alignments: (Bits) Value seq339 383 4e-104 >seq339 Length=192476 Score = 383 bits (424), Expect = 4e-104 Identities = 320/391 (82%), Gaps = 10/391 (3%) Strand=Plus/Plus Query 1 CGAAACCGTGCGCTGTGTGGAGGAGGGCGTGTTGATGTCCACGGCGGATGCCAACGTTGG 60 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct 88319 CGAAACCGTGCGCTGTGTGGAGGAGGGCGTGTTGATGTCGACGGCTGATGCCAACGTCGG 88378 Query 61 TTCAATCTTCGGCATCGGCTTTGCCGCGTGGAGTGGCGGCGCGTTGCAGTTTATCAACCA 120 || |||||||| |||||||||||||| ||||| ||||| ||| |||| || |||||||| Sbjct 88379 CTCGATCTTCGGTATCGGCTTTGCCGCCTGGAGCGGCGGAGCGCTGCAATTCATCAACCA 88438 Query 121 GTACGGGCTGAACGACTTCATCGCCCGCGCCCGCTACCTGGCAGAGCAGTATGGGGAGCG 180 |||||| |||||||| ||| |||||||||||||||||||||| ||||| ||||| ||||| Sbjct 88439 GTACGGCCTGAACGATTTCGTCGCCCGCGCCCGCTACCTGGCCGAGCAATATGGTGAGCG 88498 Query 181 CTTCTCGCCGCNNNNNNNNNNNNTGGAGAAAGCCGCGCAG--GGTGA-AGTGTTCCGGTA 237 |||| |||||| |||||||||| || ||| | || | | || | Sbjct 88499 CTTCACGCCGCCGGCGCTGCTGTTGGAGAAAGCTGCACAGAACGCGACCTTCTGACGCTT 88558 Query 238 ATCAAAATGTAGGAGGGGAGAGCTTGCTTTGAAGGTGTATTTCAAGGCAGGCTCT-GGGG 296 | |||| | ||| |||||| ||||| | ||||||||||||||||||| |||| Sbjct 88559 TTGGCCATGT--GCGGG----GCTTGCCTTGAAAGGGTATTTCAAGGCAGGCTCTGGGGG 88612 Query 297 TGTGCAATATTCCCATCGCCGTGTCAGGTATTTTTTATGTCGCTACGCGTCTGCATCCTG 356 ||| || ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 88613 TGTTCATTATTCCCATCGCCGTGTCAGGTATTTTTTATGTCGTTACGCGTGTGCATCCTG 88672 Query 357 GAAACCGATATTCTGCGCCCCGCTTTGATCG 387 ||||||||||| ||||| || | |||||| Sbjct 88673 GAAACCGATATCCTGCGTCCTGGGCTGATCG 88703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1135840903200