Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001745.1 Length=273 Score E Sequences producing significant alignments: (Bits) Value seq45 271 1e-70 >seq45 Length=185997 Score = 271 bits (300), Expect = 1e-70 Identities = 224/273 (82%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 1 TCGGGGCCACGGCCCCAATGCGGTACCTGGGGCACCAACCGCCATTGATCGGGCACAGAT 60 |||| ||| ||||||||| |||| | | | ||| || ||||| | |||| ||| | Sbjct 104687 TCGGCGCCTCGGCCCCAAAACGGTCCATCGCGCAGCACCCGCCCTGAATCGCATACATGT 104628 Query 61 CCAGACGCGTGCCGGCATACACCACCGGGGCGCCCGGTTGCGCGGCATCCAGCGTGCGCG 120 |||| ||||||||||||||||||||||| ||||| || || || || ||||| || |||| Sbjct 104627 CCAGCCGCGTGCCGGCATACACCACCGGCGCGCCGGGCTGGGCTGCGTCCAGGGTTCGCG 104568 Query 121 CGGTGGCACAGCCGGTGAGTTGCAGCGCCATCAAGAGCAGCAGTGCTTTATTCATCGCCG 180 | || ||||| ||||| ||||||||||||| || | || || | |||||||||| | | Sbjct 104567 CAGTCGCACACCCGGTCAGTTGCAGCGCCAGCAGCACCATCAATAGTTTATTCATCACTG 104508 Query 181 CCCAGGTGGTGCTCACCCCAACGTGGCAGCATGTCCTGGGGAATGTTCAACAGGTTGAGA 240 | || |||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct 104507 CTCAAATGGTGCTCGCCCCAGCGCGGCAGCATGTCCTGGGGAATGTTCAGCAGGTTGAGA 104448 Query 241 ATGCGCGCCACCACAAAGTCCACCAGGTCATCG 273 || |||||||||||||||||||||||||||||| Sbjct 104447 ATCCGCGCCACCACAAAGTCCACCAGGTCATCG 104415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 774294934490