Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq58 448 1e-123 >seq58 Length=338205 Score = 448 bits (496), Expect = 1e-123 Identities = 344/415 (83%), Gaps = 0/415 (0%) Strand=Plus/Plus Query 1 CGACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCT 60 ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 329643 CGACGTTGGGGCTCTGGAAGCCGACGTCATAGATATGGAAGCCCAGGTGCATGATCTTCT 329702 Query 61 GGTCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNN 120 |||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| Sbjct 329703 GGTCCAGGTGCAGGTACGGGTAGTTGCCGTCCACCGGCAGCGACGGCGCCAGTTTCACCA 329762 Query 121 NNNNNNNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGC 180 ||||||||||||||| ||||||||||||||||||||||||| Sbjct 329763 CACCCACCAGCATCAGCGGCGCCACTTCACCGGCGGCGCGGGCCACGGCGAGGATCATGC 329822 Query 181 CGGTCGTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGG 240 ||||| |||| |||||||| ||||| |||| ||||||||||||||||| || ||||||| Sbjct 329823 CGGTCATCATCGCCGGGCTGGCCATCGGCAGCACGATCTTCCACAGCGTTTCCGCCTTGG 329882 Query 241 TCGCGCCCAAGGCCAGCGAGCCCTCGCGCACGGTACGCGGAATACGCGCCAAACCTTCTT 300 ||||||||| |||| || || || || ||||| || ||||| ||||||| ||||||| Sbjct 329883 TCGCGCCCAGTGCCAAAGAACCTTCACGTACGGTGCGAGGAATCCGCGCCAGGCCTTCTT 329942 Query 301 CGGTGGCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACAGCA 360 | |||||||||||||||||||| || |||||||| |||||||||| |||||||| |||| Sbjct 329943 CAGTGGCCACGATCACCACCGGTACCGCCAGCAGCGCCAGGGTCAGGGATGCCCAGAGCA 330002 Query 361 GGTCCGGGGTACCCAAGGTCGGCGCCGGCAGTGCTTCGGGGAAGACCAAGCGGTC 415 | | || ||||| || ||||| ||||||| || |||| ||||| || ||||| Sbjct 330003 GACCAGGCGTACCGAAAGTCGGTGCCGGCAAGGCCTCGGCGAAGAACAGCCGGTC 330057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241426113920