Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01001951.1 Length=416 Score E Sequences producing significant alignments: (Bits) Value seq256 556 3e-156 seq800 183 7e-44 >seq256 Length=183033 Score = 556 bits (616), Expect = 3e-156 Identities = 373/416 (90%), Gaps = 0/416 (0%) Strand=Plus/Minus Query 1 TCCATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCGACA 60 |||| || || |||||||||| ||||||||| || || |||||||||||||||||||||| Sbjct 152510 TCCACCCTAATGCCATGACCCTGGTGGTGTTCGGTGATAACGGCGAGCTGCACCGCGACA 152451 Query 61 CCTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGG 120 |||| ||||||||||| ||||| |||||||||||||||||||||||| | ||||| |||| Sbjct 152450 CCTACTACTCGGTGGGCGGCGGATTCGTGGTGGATGAAGCCCAGGCCAACAGCGGCGTGG 152391 Query 121 CGGACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCAGC 180 ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||| Sbjct 152390 CGGACATGGACCGCACCGAGCTGCCCTATGATTTTTCCAGTGCGGTGGAACTGCTGCAGC 152331 Query 181 TGTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTGGC 240 ||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||| Sbjct 152330 TGTGCAAGACCCACAACCTGCGCGTCGCTGAGCTGATGTTGGCGAATGAAAAAACCTGGC 152271 Query 241 GCAGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTGCG 300 || ||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 152270 GCTCGGAAGAAGAAATCCGCAGCGGCCTGATGAAGCTTTGGCGCGCCATGCAGGATTGCG 152211 Query 301 TGGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCGCG 360 ||||||| ||||| ||||||||||| ||||| ||||||||| | || || || || || | Sbjct 152210 TGGAGCAAGGCCTAAAGCACGAAGGCATCCTTCCCGGCGGCCTTAATGTACGGCGCCGTG 152151 Query 361 CTGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTCG 416 | |||||||| ||||||||||||||||||||| |||||| || |||||||||||| Sbjct 152150 CAGCCAAGTTGCACCGCAGCTTGCAGGAGCTGGGCAAGCCGAACGTGATCGGCTCG 152095 >seq800 Length=41043 Score = 183 bits (202), Expect = 7e-44 Identities = 294/418 (70%), Gaps = 6/418 (1%) Strand=Plus/Minus Query 2 CCATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCG-ACA 60 ||| |||||||||||| ||| | | | |||||||||||| | || | || | | | Sbjct 22292 CCACCCCAACGCCATGTCCCTGCATGCCTACGGCGAAAACGGCCCGTTG-AGCGAGCAAA 22234 Query 61 CCTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGG 120 | || ||||||||||| ||||||||| | | || | || | ||| | |||| | | Sbjct 22233 CGTACTACTCGGTGGGCGGCGGTTTCATCATCGAAGCGGCAGAAGCCGAGTCCGGTATCG 22174 Query 121 CG--GACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCA 178 || ||| | || | | ||||||| || ||||| || ||||| || ||| || Sbjct 22173 CGCCGACCAGCGAAGTGC--AATTGCCCTACGACTTTTCGAGCGCCGTCGAACTGCTGGC 22116 Query 179 GCTGTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTG 238 ||||||| | ||| |||||| ||| |||| |||||| |||| || || |||| Sbjct 22115 CTTGTGCAACAAGCACGGCCTGCGGGTTTCCGAGCTGATGATGGCCAACGAGCGGGCCTG 22056 Query 239 GCGCAGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTG 298 ||||||||| | || ||||||||||||||| || | ||||| | |||| || || Sbjct 22055 GCGCAGCGATGCCGAGATCCGCAGCGGCCTGCTGCATATCTGGTCGGTGATGCGTGAATG 21996 Query 299 CGTGGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCG 358 ||| || || ||||| |||||||| |||||||||||||| || | |||| || || Sbjct 21995 CGTCGAACAAGGCCTGCGCCACGAAGGCATCCTGCCCGGCGGTCTGGATGTGCCACGGCG 21936 Query 359 CGCTGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTCG 416 ||| || || || ||||||||| ||| ||| | ||| ||||| || ||| |||| Sbjct 21935 CGCGGCGAAATTGCACCGCAGCCTGCTGGAAATCGGCAAACCCAACGTTATCACCTCG 21878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1228627906560