Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002003.1 Length=209 Score E Sequences producing significant alignments: (Bits) Value seq173 125 8e-27 >seq173 Length=76517 Score = 125 bits (138), Expect = 8e-27 Identities = 147/192 (77%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 3 AACAGCACGCGCACGTAGCGGCCCGAGGTCTTCGGGGCCGGTCCACAGGCCACCGGCGGC 62 || |||| |||||||||| ||| |||||| | ||||| | |||||| ||||||||| || Sbjct 68965 AAGAGCATGCGCACGTAGTGGCT-GAGGTCCTTGGGGCTGCTCCACAAGCCACCGGCCGC 68907 Query 63 GAGGTCACGCACCCGGGGGTCGGTGCCGGCCTTCGCCATCCTCGTAGCCGTGGGCGCGAT 122 ||||| |||||| ||| ||||| || | | | ||| || | || || |||||||| Sbjct 68906 AAGGTCGCGCACCTGGGCGTCGGCGCTGACGGT-GCCGTCTGCATAACCCCGGGCGCGAA 68848 Query 123 AGCTCATTTCGCGCACCGGTACCCAGGAAACTCGGACTGGTTCATTTCGCAAGGGTGTGA 182 ||| | || ||| ||||| || | ||| |||| |||||||||| || || ||| ||| Sbjct 68847 AGCCCGGTT-GCGAGCCGGTGCCGACGAAGCTCG-ACTGGTTCATCTC-CAGGGGCTTGA 68791 Query 183 GCAGGCTGCTTT 194 |||||||||||| Sbjct 68790 GCAGGCTGCTTT 68779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569522720410