Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq1270 684 0.0 >seq1270 Length=4030 Score = 684 bits (758), Expect = 0.0 Identities = 496/570 (87%), Gaps = 4/570 (1%) Strand=Plus/Plus Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63 |||||| ||| |||| ||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct 2516 TCGACCATCGTGTTCTGGTCGTTCCGGGTCATGGTGGGCCTGGGCTTCCTGATGATCTTC 2575 Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123 ||||| || |||||||| ||||| |||||| |||||||||||||||||||||||||||| Sbjct 2576 ACCGGCCT-GTTCAGCCTCTGGCT-GCGCCGTGGCGACAAGATGTACACGTCCAAGCCGT 2633 Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183 |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2634 TCCTGTACCTGGCGCTGTGGATGGGCCCGTCCGGCCTGATCGCGATTCTCGCCGGCTGGT 2693 Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATG 243 ||||||| || |||||||| |||||||||||||||||||| |||||||||||||| || | Sbjct 2694 TCACCACCGAGATCGGCCGACAGCCGTGGGTGGTCTACGGGCTGATGCGCACGGCAGACG 2753 Query 244 CGTCCTCCGGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGT 303 | || ||| || || | | |||||||| |||||| |||||||||| |||||||||| Sbjct 2754 CCTCGTCCAACCACAGTTTTGCGCAGATGAGCATTACGTTGGTGTTGTTTGTGGTGGTGT 2813 Query 304 ACTTCGCGCTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGC 363 |||||||||||||||| || || |||||||||||||||||||||||||||||||| || Sbjct 2814 ACTTCGCGCTGTTCGGCGCGGGCCTGGGCTACATGATGCGCCTGGTGCGCAAAGGGCCTG 2873 Query 364 AGACCCACGAAGGCGATGAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCC 423 |||||||||| || ||||| ||||||||||| ||||| ||||||||||| || || | Sbjct 2874 TGACCCACGAAAGCACCGAGCCCACCCACGGTGGCCCTGGGCAGAAACGCACACCGGCGC 2933 Query 424 GTCCGTTGTCTGCCGCCGATGATGGCAGCGATGACGACCACACCCACATCCAGCACAAGG 483 |||||||||| || || ||||| | ||||| ||| ||| | ||| | | |||||| Sbjct 2934 GTCCGTTGTCGGCGGCTGATGACAGTGCCGATGCCGATCACGGCGACACCTTGAACAAGG 2993 Query 484 GGCATTGAG--ATGGGTATTGATCTTCCGCTGATCCGGGCCGTGATCATCATCTTCGGCA 541 || | |||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2994 GGAACTGAGCCATGGGTATTGATCTTCCGCTGATCTGGGCCGTGATCATCATCTTCGGCA 3053 Query 542 TCATGATGTACGTGGTCATGGACGGCTTCG 571 |||||||||||||||||||||||||||||| Sbjct 3054 TCATGATGTACGTGGTCATGGACGGCTTCG 3083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724558441760