Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq58 511 1e-142 seq582 89.7 1e-15 >seq58 Length=338205 Score = 511 bits (566), Expect = 1e-142 Identities = 325/353 (92%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct 88323 CGACCGCCTGCGCCATGTGGCCGAGCGCGCCGAGCTGGGGGAAGGCCGCGAAGCCATCAT 88264 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 |||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||| Sbjct 88263 CGCCGTGACCATCCCCGAGAAACCGGGCAGCTTCAAGGCCTTCTGCGAGGCCGTGGGCAA 88204 Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180 ||||||||||||||||||||||||||| | ||||||||| | ||||||||||| ||||| Sbjct 88203 GCGCCAGATCACCGAATTCAACTACCGCTACCACTCCGGGCGTGAGGCGCACATTTTTGT 88144 Query 181 CGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCTGACCGA 240 |||||||||||||||||| || | |||||| ||||||||||||||||||||||| ||| Sbjct 88143 CGGCGTGCAGACCCACCCGGAAAACGACCCGCGCAGCGCGCTGATCGCCAGCCTCACCAG 88084 Query 241 GCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCCGCCA 300 |||||||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct 88083 CCAGGGTTTCCCGGTGCTGGACCTGACGGAAAACGAACTGGCCAAGCTGCACATCCGCCA 88024 Query 301 TATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTCG 353 ||||||||||||||||||||||||||||||| | || |||||||||||||||| Sbjct 88023 TATGGTCGGCGGCCATGCGGCGCACGTCAGCGACGAGGTGGTGTTCCGCTTCG 87971 >seq582 Length=79996 Score = 89.7 bits (98), Expect = 1e-15 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 |||||| |||| ||||||||| || ||||||||||| ||| ||||||||| | | Sbjct 43754 CGACCGTTTGCGTTTTGTGGCGGAACGGGCCGAGCTGGGCGAATTCCGCGAAGCCGTGTT 43695 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 ||||| ||||| | ||| ||| |||||||||||| |||||| | | | ||| Sbjct 43694 TGCCGTCACCATGCGCGAACAGCGGGGCAGCTTCAAGCGCTTCTGCTCGCTCATCGGCGC 43635 Query 121 GCGCCAGATCACCGAATTCAACTACCG 147 |||| | | || |||||||| ||||| Sbjct 43634 GCGCAACGTGACGGAATTCAATTACCG 43608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027056140640