Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002062.1 Length=351 Score E Sequences producing significant alignments: (Bits) Value seq643 336 4e-90 >seq643 Length=55350 Score = 336 bits (372), Expect = 4e-90 Identities = 296/369 (80%), Gaps = 20/369 (5%) Strand=Plus/Plus Query 1 ACCAGGTCACCATCGTCGGCGCCGAATGCCGACCACGGTGCCGGTGTACCAGCGGGGTGA 60 |||||||| || ||||| ||||||| ||| |||||||||||||| ||||||||||||| Sbjct 39869 ACCAGGTCGCCGTCGTCAGCGCCGA-TGCTCACCACGGTGCCGGTC-ACCAGCGGGGTGA 39926 Query 61 TTTCCACCACGTCGCCGTTCACATAGGCGTCATCGGTGCTTTCATTGAAGCGCCCGTAGA 120 |||||||||||| |||||| || |||||||| ||||||||||| ||||||| || || | Sbjct 39927 TTTCCACCACGTTGCCGTTGACGTAGGCGTCGTCGGTGCTTTCGCTGAAGCGACCATACA 39986 Query 121 ACTCATACCAGGCCCACACGCCCACCACACTGAGGATGACGATCAGCGCCAGGCCGATCA 180 | || ||||| |||||||||||| | | ||||||||||||||||||||| | | || Sbjct 39987 ATTCGTACCAACCCCACACGCCCAAGGCGCCGAGGATGACGATCAGCGCCAGCACAAACA 40046 Query 181 GCATCACTTTGCGTTTGCGCGGGTTGGTGTCTTTGGGTTGTTCGGTC------------- 227 |||| ||||||||||||||||| ||| || ||||||||||| | | Sbjct 40047 GCATGACTTTGCGTTTGCGCGGATTGCTGGTGTTGGGTTGTTCAGCCTTGTTTGTTTCAG 40106 Query 228 --GCGTTGGTGCT---TTCGGCAGTGGCCATGACAAATACCTCAAATTATTCCGTGCGTG 282 |||||| |||| |||||||||||||||||||| ||||| |||||||| ||||| | Sbjct 40107 GAGCGTTGTTGCTGGTTTCGGCAGTGGCCATGACAAGTACCTTGAATTATTCAGTGCGCG 40166 Query 283 TTGCGGGGGTGGTCGCGGCCACGCTGTTGGCGTGATACCCGCCACCCAGGGCCTGCATCA 342 | || |||||||||| ||||||| | | |||||| | ||||| |||||||||||||||| Sbjct 40167 TGGCTGGGGTGGTCGAGGCCACGTTATCGGCGTGGAAACCGCCGCCCAGGGCCTGCATCA 40226 Query 343 ATTGAATCG 351 |||||||| Sbjct 40227 GTTGAATCG 40235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1020657036960