Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002083.1 Length=362 Score E Sequences producing significant alignments: (Bits) Value seq523 181 2e-43 >seq523 Length=83696 Score = 181 bits (200), Expect = 2e-43 Identities = 262/365 (72%), Gaps = 6/365 (2%) Strand=Plus/Plus Query 1 CGAGGCCAGCGACGAGGCACGTACTCACCATTGGCGCTGTGGCAATGACATTGCCCACAG 60 ||| |||||||| || || || || ||| |||||||||||||| || || |||||||| Sbjct 10726 CGACGCCAGCGATGAAGCCCGCACCACCCACTGGCGCTGTGGCAACGATATCGCCCACAG 10785 Query 61 CTTGCAGGTAGCTGGGTTCAAGGGCCGCTTCCAGATGCTCAGCGACCCACTGTGCATGGG 120 | || || || ||||||||||||||||||| |||||| | |||||| |||||||||| Sbjct 10786 CCTGGGCGTGGCGGGGTTCAAGGGCCGCTTCCGGATGCTGATTGACCCATTGTGCATGGG 10845 Query 121 CCCCGTACGCAATCTTCCCAGCGCCGAATTCC--GCCGCCTGCGCAGCGCTTTTATCAGC 178 ||| || | | || || || ||| || |||| | |||||| | ||||||| Sbjct 10846 CCCGGTGCAGGACCTGCCTGCCGAGCAATACCAGGCCG--TTCGCAGCCGCTATATCAGC 10903 Query 179 CAGACTTTTGCCTTGACCCCTGCTGATGTAAACCTGCGCGTTGACGGGGAATA-CACCCA 237 ||| |||||| || || || || | || || | ||||| |||| Sbjct 10904 CAGGTGTTTGCCATGGATGAGGCCGAAGTGGCGCGCCGGCATGCGGACGAATATCACCAT 10963 Query 238 ATTGGACGCACTGGCCGGCGCCGAACATAGCGTGTTGTGGTGTGAAGCGGATGCCTATGA 297 ||| || ||||| | |||||| || ||||||||||||||||| |||||||| || || Sbjct 10964 CTTGAAC-AACTGGGCAGCGCCGGCCACAGCGTGTTGTGGTGTGAGGCGGATGCGTACGA 11022 Query 298 CCAATTGTTCCTGATTCGCGCACTCTCAAGTCTTGAACGCACGCCGAAAAAACTTGAGCT 357 || ||||||||||||||||| || | | ||||| | ||| ||||||| ||| | Sbjct 11023 TCAGTTGTTCCTGATTCGCGCGCTGGCTGGGCTTGAGCATCTGCCTGAAAAACTGGAGTT 11082 Query 358 GATCG 362 ||||| Sbjct 11083 GATCG 11087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055852107200