Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq133 161 2e-37 seq4335 159 7e-37 >seq133 Length=18310 Score = 161 bits (178), Expect = 2e-37 Identities = 195/260 (75%), Gaps = 9/260 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | | ||||| | ||||||| |||||||||||||||||||| Sbjct 8767 CTTCTTAGAGGGACTACCTACCTCAAGTGGGGGGAAGTTCGAGGCAATAACAGGTCTGTG 8708 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATC 189 |||||||||||| ||||| ||||||||| |||| || | || | || ||| Sbjct 8707 ATGCCCTTAGATACCTTGGGCTGCACGCGCGTTACAATGTAAAGTGGAAAAAGGTT---- 8652 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA-ACTCTGTCGTGCTGGGGATAGAGCAT 248 ||| | ||| ||||| ||||||||| | | || ||||| ||| ||||||| | | | Sbjct 8651 -CCTGGACCGAAAGGTTTGGGTAATCATTTGAATACTCT-ACGTAATGGGGATTGTTCTT 8594 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||| | | |||||||||||| ||| ||||||| |||| | || ||| Sbjct 8593 TGTAATTATCGAACATCAACGAGGAATTCCTTGTAAGCGTAAATCATTACTTTACGCTGA 8534 Query 309 TTACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 8533 ATATGTCCCTGCCCTTTGTA 8514 >seq4335 Length=212 Score = 159 bits (176), Expect = 7e-37 Identities = 163/209 (78%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC 180 |||||||||||||||||||||||| | |||| |||||||||||||||||| | || || | Sbjct 1 CAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGATAAAGTCAGC 60 Query 181 GAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA 240 | | | | |||| || ||| | ||||| | || || | ||||||| | |||| Sbjct 61 GTG--CGTTTCCTTTCTCGAAAGAGATTGGTAAACCAGTGAATGTTTGTCGTGATTGGGA 118 Query 241 TAGAGCATTGCAATTATTGCTCT-TCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 | | |||||||||||| ||| | |||||||||| || |||||| | | ||||||| | Sbjct 119 TCGGAAATTGCAATTATT-TTCTGTGAACGAGGAATTCCAAGTAAGTGTGAGTCATCAAC 177 Query 300 ACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||||||| Sbjct 178 TCGCGCTGATTACGTCCCTGCCCTTTGTA 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947067344640