Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq158 480 1e-133 seq3 253 4e-65 seq1401 145 1e-32 seq1400 132 9e-29 seq2584 113 8e-23 seq11019 98.7 2e-18 seq2 73.4 7e-11 >seq158 Length=3153 Score = 480 bits (532), Expect = 1e-133 Identities = 298/319 (93%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3123 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 3064 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 3063 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGCAACCCACC 3004 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 | ||| || ||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 3003 CTTTTAGGGTATTGCATACTGAATACATAGGTATGCAAGGCGAACGCGGCGAACTGAAAC 2944 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2943 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGCGGCGAGCGAAAT 2884 Query 241 GGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCAT 300 |||| |||||| |||| |||||| | | |||| |||||||||||||||||||||||| Sbjct 2883 GGGAAGAGCCTGTACGTGATAGTCGGACCGATAACAGAATCCTCTGGAAATAGGAGCCAT 2824 Query 301 AGCGGGTGATAGCCCCGTA 319 || |||||||||||||||| Sbjct 2823 AGTGGGTGATAGCCCCGTA 2805 >seq3 Length=3814 Score = 253 bits (280), Expect = 4e-65 Identities = 255/329 (78%), Gaps = 18/329 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | | |||||||||| ||||| ||||| ||||| | Sbjct 621 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAA 680 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||||| ||||||| ||||||||||| |||| || |||||||| ||||| || Sbjct 681 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGC 740 Query 121 CCT------TTGGGT-CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAA 173 | | ||| | | || || |||||||||||||| | ||||||| || ||| Sbjct 741 CATCATAAGATGGTTACCTTACA--CTGAATACATAGGTGTATGGAGCGAACCAGGGGAA 798 Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233 |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 799 CTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGA 858 Query 234 GCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAA 290 ||||| |||| |||| ||| ||| | |||| ||| |||| ||||||||| Sbjct 859 GCGAACGGGGACTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAA 912 Query 291 TAGGAGCCATAGCGGGTGATAGCCCCGTA 319 | ||||||| |||||||||||| ||| Sbjct 913 GTGCGGCCATAGTGGGTGATAGCCCTGTA 941 >seq1401 Length=5644 Score = 145 bits (160), Expect = 1e-32 Identities = 184/253 (73%), Gaps = 14/253 (6%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| || ||||||||||||||| || |||||||||| |||| Sbjct 2171 GGTGGATGCCTTGGCACCAGGAGCCGATGAAGGACGTAGGAGGCTGCGATAAGCCTCGGG 2230 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| ||| | || ||||||| ||| ||||||||||||||||| || | | || Sbjct 2231 GAGCTGTCAACCGAGCTGTGATCCGAGGATGTCCGAATGGGGAAACCCAGCAC---GAGT 2287 Query 130 CATTGCATG----------CTGAATACATAGGTA-TGCAAAGCGAACGCGGCGAACTGAA 178 || | || ||||||| ||||| || || ||||| || ||| |||| Sbjct 2288 GATGTCGTGTTACCCGCGCCTGAATATATAGGGCGTGTGGAGGGAACGTGGGGAAGTGAA 2347 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 |||||| |||| | |||||| ||||| |||||| |||||| |||||||||||||||| Sbjct 2348 ACATCTCAGTACCCACAGGAAGAGAAAACAACCGTGATTCCGTGAGTAGTGGCGAGCGAA 2407 Query 239 ATGGGATGAGCCT 251 | ||| ||| || Sbjct 2408 AGCGGAAGAGGCT 2420 >seq1400 Length=5517 Score = 132 bits (146), Expect = 9e-29 Identities = 184/251 (73%), Gaps = 15/251 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| | |||||||||||| | | |||||||||||||||| || ||||||| Sbjct 2404 AGAGCACACAGGGGATGCCTTGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGATA 2463 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||| | |||||| | || ||||| ||||||||||||||||||||| ||| Sbjct 2464 AGCTCCGGGGA-TTAGCAAATATGAATTAATCCGGAGATTTCCGAATGGGGAAACCTGGC 2522 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 | | | | | | | |||| | ||| ||| ||| | |||||||||| Sbjct 2523 ----TAGTTGAAGACTAGTCG--TACA-AAGTACGCA-----AACCTGCTGAACTGAAAC 2570 Query 181 ATCTAAGT-AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 |||||||| ||| | ||||| ||||| || |||| || |||||||||||||||||| Sbjct 2571 ATCTAAGTAAGCAG-AGGAAGAGAAAATAATAATGATTTCCTAAGTAGTGGCGAGCGAAA 2629 Query 240 TGGGATGAGCC 250 || | ||||| Sbjct 2630 GGGAAAGAGCC 2640 >seq2584 Length=1774 Score = 113 bits (124), Expect = 8e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| |||||||||||||||||| || ||||||| Sbjct 818 AGGGCATTTGGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATA 877 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| ||||||| | || || || |||||||||| ||||||||||||||||||||| Sbjct 878 AGCGTCGGGGAG-GTGCGAATACCCTTTGATCCGACGATTTCCGAATGGGGAAACCC 933 Score = 105 bits (116), Expect = 1e-20 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 141 GAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAA 200 ||||||||||| | |||||||| ||| ||||||||||||||||||| | | |||||| Sbjct 1146 GAATACATAGGGGTTAGAAGCGAACCCGGGGAACTGAAACATCTAAGTACCCGGAGGAAA 1205 Query 201 AGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||||| ||||| ||| ||||||||||||||||| Sbjct 1206 GGACATCAAACGAGACTCCGTAAGTAGTGGCGAGCGAA 1243 >seq11019 Length=406 Score = 98.7 bits (108), Expect = 2e-18 Identities = 145/203 (71%), Gaps = 12/203 (6%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||| |||||||| ||| | | |||||||||| | ||| || ||||| |||||||| Sbjct 208 ATGGGGGATGCCTAGGCTCTCAGAGGCGATGAAAGGCGTGATAAGCTGCGAAAAGCTGCG 267 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTG- 126 |||| | ||| |||| ||||||||||||| | |||||||| |||||| ||| Sbjct 268 GGGA-CGGGCACACACCGATTGATCCGCAGATACCTGAATGGGGCAACCCGTTATGTTGA 326 Query 127 GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAA 186 | ||| || | | |||||| ||| ||| || |||||||||||||||| Sbjct 327 AGACATAACACACCG-----ATAGGTGGGCA-----AACCCGCTGAACTGAAACATCTAA 376 Query 187 GTAGCTGCAGGAAAAGAAATCAA 209 |||| | |||| |||||| ||| Sbjct 377 GTAGGCGGAGGAGAAGAAAACAA 399 >seq2 Length=66720 Score = 73.4 bits (80), Expect = 7e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||| |||||||||| |||| || |||||||||||| ||| ||||| |||||||||| Sbjct 60878 GAATTGAAACATCTTAGTAACTAAAGGAAAAGAAATTAACAAAGATTTTGAAAGTAGTGG 60937 Query 231 CGAGCGAAAT 240 ||||||||| Sbjct 60938 TGAGCGAAAT 60947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918271378080