Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002205.1 Length=300 Score E Sequences producing significant alignments: (Bits) Value seq58 437 1e-120 >seq58 Length=338205 Score = 437 bits (484), Expect = 1e-120 Identities = 264/277 (95%), Gaps = 1/277 (0%) Strand=Plus/Minus Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 267916 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGC 267857 Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTT 143 ||||||||| |||||| ||||||||||| |||||||||||||||||||| || ||||||| Sbjct 267856 AAGAATATT-GGCCACGGCAAGAGGATGCGTGACATACGCCTCGCCACTGCGGCGGCGTT 267798 Query 144 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTG 203 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 267797 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTGGTCTG 267738 Query 204 CGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTC 263 ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 267737 GGCCGAGGTAGGTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTATTAACTC 267678 Query 264 CTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 300 |||||| |||||||||||||||||||||||||||||| Sbjct 267677 CTGCCGTTGGCTGTGACCCCGCGCCGTGCTACGTCGA 267641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 857479893120