Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1401 742 0.0 seq3 343 5e-92 seq1400 333 9e-89 seq158 324 5e-86 seq5126 201 4e-49 seq9441 165 3e-38 seq2 82.4 3e-13 >seq1401 Length=5644 Score = 742 bits (822), Expect = 0.0 Identities = 504/564 (89%), Gaps = 5/564 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 4749 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 4690 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 4689 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGG-CAACCGCCCCAG 4631 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||||||||||||||||| | ||||||||||| || |||||||| |||| Sbjct 4630 TTAAACTACCCACCAGGCACTGTCCCTGAACCAGATCATGGTCCGAGGTTAGAGGTCCAA 4571 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | || ||||||||||||||||||||||||||||| | ||| |||| ||| ||| ||| Sbjct 4570 TTCGATCAGAGTGGTATTTCAACAACGACTCCACGATAACTGGCGTCACCGTTTCACAGT 4511 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| Sbjct 4510 CTCCCACCTATCCTACACAAACCGAACCGAACACCAATACCAAGCTGTAGTGAAGGTCCC 4451 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||| Sbjct 4450 GGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAATGCAATTTCGCCGA 4391 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | || |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 4390 GTCTACGGTTGAGACAGCTGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 4331 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 4330 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 4271 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 ||| | || || | | | | | | || || |||||||||||||||||||||||| Sbjct 4270 ATTCTCAGCTTCGCTCCCGAAG----GAACTAACCGGTCCTCTTAACCTTCCAGCACCGG 4215 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||||||||||| ||| Sbjct 4214 GCAGGCGTCAGTCCGTATACATCG 4191 >seq3 Length=3814 Score = 343 bits (380), Expect = 5e-92 Identities = 422/568 (74%), Gaps = 20/568 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||| ||| ||||||||||||||| | ||| ||| ||| |||| || ||| |||| | Sbjct 2963 TCGACGTGTCTGTCTCGCAGTCAAGCGCGCTTTTGCCTTTATACTCTACGACC-GATTTC 2905 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | ||| | ||||| | ||||| | | |||||||||| ||| ||||| | |||||||| Sbjct 2904 CGACCGGTCTGAGCGCACCTTCGTACTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCA 2846 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||||||||||| |||||||| | | || ||| | || || |||||| || Sbjct 2845 GTCAAACTACCCACCATACACTGTCCTCGATCCGGATAACGGACCTGAGTTAGAA--CCT 2788 Query 180 CTACGGT--CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237 | | | | ||| |||||||||||| | |||||| ||| |||| ||| ||| Sbjct 2787 CAAAGTTGCCAGGGTGGTATTTCAAGGTTGGCTCCACGCGAACTGGCGTCCACGCTTCAA 2728 Query 238 AGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGT 297 || |||||||||||||||||||| | | || ||| | | |||||||||| ||||| Sbjct 2727 AGCCTCCCACCTATCCTACACAAGCAAATTCAAAGTCCAGTGCAAAGCTATAGTAAAGGT 2668 Query 298 CC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGA-GCATCTTTACTCGTACTGCAATTTC 355 | |||||||||| |||| |||||| || || ||||||| || | | ||||||| Sbjct 2667 TCACGGGGTCTTTCCGTCTAGCCGCG-GATACACTGCATCTTCACAGCGATTTCAATTTC 2609 Query 356 ACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTT 415 || | | || ||| |||||||| | |||||||||||||||||||||||||||||| Sbjct 2608 ACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTT 2549 Query 416 ACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGG 475 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct 2548 ACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGG 2489 Query 476 CTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGC 535 |||| || | || || | || ||| || | |||||||||| || Sbjct 2488 CTTCGATCAAGAGCTTCGC----------GTTAGCTAACCCCATCAATTAACCTTCCGGC 2439 Query 536 ACCGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||||| || ||||| || Sbjct 2438 ACCGGGCAGGCGTCACACCCTATACGTC 2411 >seq1400 Length=5517 Score = 333 bits (368), Expect = 9e-89 Identities = 416/568 (73%), Gaps = 27/568 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||| ||||| | ||| ||||||||| ||| ||| || ||||| || | || || Sbjct 4751 TCGGCTTGTCTGCCTCACAGTCAAGCAAGCTTATGCTATTGCACTCCTCATACGGTTACC 4692 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||| ||||||| ||||||||||| |||| ||||| | ||| |||||| Sbjct 4691 AAGCGTATTGAGCTTACCTTTGAAAGCCTCCGTTACCTTTTTGGAGG-CGACCACCCCAG 4633 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||| || || ||||| | | || | |||||| | | | Sbjct 4632 TCAAACTACCCATCAAACAATGTCCTCCGACTAGCGGA---------GTTAGACACCGAA 4582 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| | || ||||||||||||| |||||||| || |||||| ||||| ||||||| Sbjct 4581 TACAGAAAGGGTGGTATTTCAACGTTGACTCCACGACGCCTAGCGACGCCGCTTCATAGT 4522 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||||||||||||||||| | | | | |||| |||| || | |||||||||| | Sbjct 4521 CTCCCACCTATCCTACACATCCTGTATCCAATGTCAATGTTAAATTGTAGTGAAGGTGCA 4462 Query 301 -GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| ||||| | ||| | | | || |||| || | || ||||||||||| Sbjct 4461 TGGGGTCTTTCCGTCCCGTTGCGGGTACCCGGCGTCTTCACCGGGACCACAATTTCACCG 4402 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 || ||| ||||||||| | || ||||||| ||||||||||||||||||||||||| Sbjct 4401 AGCTCATGGCTGAGACAGC-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACC 4343 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 4342 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 4283 Query 479 CAATTACCCGCCTCACACACCACGTGGTGT---GCTCACGAGTCCTCTTAACCTTCCAGC 535 | ||| || || ||| | || || ||||||||||||||||| Sbjct 4282 CGATTCAATGCTTC-----------GGTTTAACCCTAACATCCCCTCTTAACCTTCCAGC 4234 Query 536 ACCGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||| ||||| || ||||| || Sbjct 4233 ACCGGGCAGGTGTCAGGCCTTATACTTC 4206 >seq158 Length=3153 Score = 324 bits (358), Expect = 5e-86 Identities = 411/564 (73%), Gaps = 21/564 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||||||||| |||| | ||| ||| || |||| | || ||| || Sbjct 801 TCGACTTGTCAGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCAACACGATGTCC 860 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| || | ||||| | | ||||||||||| ||| ||||| | ||||||||| Sbjct 861 GACCGTATCTAGCGTACCTTCGAACTCCTCCGTTACACTTTAGGAGGAGA-CCGCCCCAG 919 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| || |||| ||||||||||| | || ||| | || ||||||||||| || Sbjct 920 TCAAACTGCCTACCATGCACTGTCCCCGATCCGGATAACGGACCAAGGTTAGAACCTCAA 979 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| |||||||||||| | |||||| | |||||||| |||| ||| || Sbjct 980 ACAAACCAGGGTGGTATTTCAAGGTTGGCTCCACGAGAACTAGCGTCCCCGCTTCAAAGC 1039 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||||||||||||||||| | | | || ||||| | |||||| ||| ||||| | Sbjct 1040 CTCCCACCTATCCTACACAGATTGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTTCA 1099 Query 301 -GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| |||| |||||| | | ||||| | || | | ||| ||| | | Sbjct 1100 TGGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACATTTCAACTTCGCTG 1159 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | || || ||||||| || |||||||||||||||||||||||||||||||||| Sbjct 1160 AGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1219 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| Sbjct 1220 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTC 1279 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 ||| | | || ||| ||| ||| |||| |||||||||||| Sbjct 1280 AATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCAGCACCG 1320 Query 540 GGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||| || ||||| || Sbjct 1321 GGCAGGCGTCACACCCTATACGTC 1344 >seq5126 Length=585 Score = 201 bits (222), Expect = 4e-49 Identities = 214/281 (76%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 124 AACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTAC 183 |||||||||||| ||||||||| | || ||| | || || ||||||| ||||| Sbjct 305 AACTACCCACCATACACTGTCCCGGATCCGGATAACGGACCGCGGTTAGACATCCATATA 364 Query 184 GGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTC 243 ||| || |||||||||||| | |||||||| | || ||| |||| ||| ||||| Sbjct 365 GGTAAGGGTGGTATTTCAAGGATGACTCCACGAAGGCTGGCGCCCCCGCTTCAAAGTCTA 424 Query 244 CCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGT-CCCGG 302 |||||||||||||||| ||| ||||||||| | |||||||||| ||||| | ||| Sbjct 425 CCACCTATCCTACACATGCCGACACGAATGCCAGTGTAAAGCTATAGTAAAGGTGCACGG 484 Query 303 GGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGC 362 ||||||| |||| |||| ||| | ||||||| || | | | ||||||||| | | Sbjct 485 GGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGT 544 Query 363 CTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGC 403 ||| | | |||||||| ||| |||||||||||||||||||| Sbjct 545 CTGCGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGC 585 >seq9441 Length=272 Score = 165 bits (182), Expect = 3e-38 Identities = 202/273 (74%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 |||||||||||||||||||||| ||| ||| ||| ||||||||||| ||||| |||||| Sbjct 272 ACCTTTGGGCGCCTCCGTTACACTTTAGGA-GGCGACCGCCCCAGTCAAACTGCCCACCT 214 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 | ||||||| || ||| | | |||||||| | || ||| ||||| | ||| Sbjct 213 GACACTGTCTCCCGGGTCGATAAGACCCGTAGGTTAGAATTTCAATACAGTCAGGGCGGT 154 Query 196 ATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTA 255 || || || || |||||| |||||| | | ||| || ||||| |||||||| Sbjct 153 ATCCCACCAGCGCCTCCACCGAAGCTAGCGCTCCGGTTTCAAAGGCTCCCGCCTATCCTG 94 Query 256 CACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTC 314 |||||| | ||| || ||||| || |||| ||| ||| ||| |||||||||| |||| Sbjct 93 TACAAACTGTACCAAAATTCAATATCAGGCTACAGTAAAGCTCCACGGGGTCTTTCCGTC 34 Query 315 CTGCCGCGCGAAACGAGCATCTTTACTCGTACT 347 ||| |||| | ||| ||||||| || ||||| Sbjct 33 CTGTCGCGGGTAACCTGCATCTTCACAGGTACT 1 >seq2 Length=66720 Score = 82.4 bits (90), Expect = 3e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 ||||||| |||| ||||||||| |||||| |||| |||| || |||| |||||||||||| Sbjct 63670 GAGACAGTAGGGAAGTCGTTACACCATTCATGCACGTCGAAAATTACTCGACAAGGAATT 63611 Query 431 TCGCT 435 ||||| Sbjct 63610 TCGCT 63606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702161578880