Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1039 86.0 1e-14 seq133 77.0 5e-12 >seq1039 Length=568 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| || | || || | || | Sbjct 360 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTGCTTGGTCGATAGGCCAAT 417 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| ||||||| |||||||||||||||| ||||||| Sbjct 418 GGTGCGAAGCTACCATCTGAGGGATTATAACTGAACGCCTCTAAGTTAGAATCC 471 >seq133 Length=18310 Score = 77.0 bits (84), Expect = 5e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 69 GCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||||||| | ||||| ||||||||||||||||||| ||||||||||||| ||| Sbjct 3893 GCTACCATCAGTTGGATAATGGCTGAACGCCTCTAAGCCAGAATCCATGCCGGAA 3839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819088856320