Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycarpum_20[genbank_20GCA_5F900092255.1_202017-01- 02] 14,005 sequences; 62,220,117 total letters Query= NC_031076.1 Length=38071 Score E Sequences producing significant alignments: (Bits) Value seq1862 98.7 2e-16 >seq1862 Length=5913 Score = 98.7 bits (108), Expect = 2e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 34857 GCGAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATACCA 34916 |||| ||| |||||| || | || ||||| || || || || ||||| || | ||| Sbjct 5193 GCGACACCATCATCACCGTCATCGGAAACCTGACGGCTGATCCTGAACTTCGTTTCACCC 5252 Query 34917 ATTCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGC 34976 |||| || || || |||||||| || || ||||| || || || |||||||| Sbjct 5253 CGGCGGGTGCCGCGGTTGCAAACTTCACGGTTGCTTCCACGCCCCGTACCTTCGACCGTA 5312 Query 34977 AAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGC 35036 | |||| |||||||| |||||||| || |||||| ||| ||| | ||||| | Sbjct 5313 ATTCCAATGAATGGAAAGACGGCGATGCGCTGTTCATGCGTTGCAACATCTGGCGCGAAG 5372 Query 35037 CGGCCGAGAACGTGGCCGA 35055 | ||||||||||| || || Sbjct 5373 CAGCCGAGAACGTCGCGGA 5391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121685359217730