Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5906 152 8e-35 seq116 141 1e-31 >seq5906 Length=214 Score = 152 bits (168), Expect = 8e-35 Identities = 166/213 (78%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||| |||||||||| | |||||| |||||| | Sbjct 7 GTACAAAGGGCAGGGACGTAATCAGCGCGAG-TTGATGACTCACACTTACTTGGAATT-C 64 Query 61 CTCGTTGA-AGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATT 119 |||||| | ||| || ||||||||| | ||||| ||||||| || |||| | || Sbjct 65 CTCGTTCACAGAA-AATAATTGCAATTTCCGATCCCAATCACGACAAACATTCACTGGTT 123 Query 120 ACCCGGAC-CTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 || | || ||| |||| | | | || ||| | ||||||||||||||||||| Sbjct 124 TACCAATCTCTTTCGAGAAAGG--AAACGCACGCTGACTTTATCAGTGTAGCGCGCGTGC 181 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGT 211 |||| | ||||||||||||||||||||||||| Sbjct 182 AGCCCCGGACATCTAAGGGCATCACAGACCTGT 214 >seq116 Length=14452 Score = 141 bits (156), Expect = 1e-31 Identities = 174/231 (75%), Gaps = 10/231 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| || || | |||||| ||||||| ||||||| | Sbjct 8509 GTACAAAGGGCAGGGACATATTCAGCGTAAGGTA-ATGACTTACGCTTACAAGGAATT-C 8566 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGA--AATTTCAAAGAT 118 |||||||| || | | |||| ||| |||| ||||| | ||| ||| |||| | ||| Sbjct 8567 CTCGTTGATGATCGATAATTACAAAGATCAATCCCTGTTACG-TGATGAATTCCT--GAT 8623 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| ||| ||| | ||| | || ||| | || |||||||||||||| Sbjct 8624 TACCCAATCCTTCCGGACCAGGCAAC---CTTTTTGCGCATCGCAATGTAGCGCGCGTGC 8680 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG 229 |||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 8681 GGCCCAAGGTATCTAAGGGCATCACAGACCTGTTATTGCCTCGGACTTCCG 8731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751943366410