Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3684 150 3e-34 seq116 80.6 5e-13 >seq3684 Length=1131 Score = 150 bits (166), Expect = 3e-34 Identities = 186/248 (75%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATG 131 |||||||||||| |||| | |||| ||||| ||||| ||| ||| | || || ||||| Sbjct 726 TTTTACTTTGAACAAATCAAAGTGCTCAAAACAGGCGTTTTGCTTGTATGTTTTTGCATG 785 Query 132 GAATAATAGAATAGGACGTGCGGTTCTA-TTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||| ||| | |||| ||| |||| ||||||| || || |||||||| Sbjct 786 GAATAATAGAATAAGACTT-CGGT-CTAGTTTTATTGGTTTTATAGATCGTTGTAATGAT 843 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| || || | |||||| | ||||| || |||||||||||||||||| Sbjct 844 TAAAAGAGACAAACGGGGGCATTCGTATTGTTGCGTGAGAGGTGAAATTCTTGGACCGCA 903 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| |||| |||||||| || ||||| ||| ||||||||||| |||||||| Sbjct 904 GCAAGACGTCCTACAGCGAAAGCATTTGCCAAGCTTGTCTTCATTAATCA-AGAACGAAA 962 Query 311 GTTAGGGG 318 || || || Sbjct 963 GTCAGAGG 970 >seq116 Length=14452 Score = 80.6 bits (88), Expect = 5e-13 Identities = 100/136 (74%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 |||||||||||||||||| | |||| ||| |||| | ||||||||||||| | Sbjct 9377 GTAATGATTAATAGGGATGGATGGGGATGTTCATATTGGTGGGCGAGAGGTGAAATTCGT 9318 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 || | |||| |||| |||||||||| |||| ||| | | | ||||||||| Sbjct 9317 TGACCCTATCAAGATGAACTTCTGCGAAAGCATTCATCAAATACTTCTCCATTAATCA-A 9259 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||| |||| Sbjct 9258 GAACGAAAGTTTGGGG 9243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915128852352