Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq1407 334 8e-90 seq5424 147 2e-33 >seq1407 Length=3311 Score = 334 bits (370), Expect = 8e-90 Identities = 190/193 (98%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1753 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 1694 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120 ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1693 GATGACTCGTCATCAGCTCTCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 1634 Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1633 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 1574 Query 181 TTAACCAGAAGTA 193 |||||||||||| Sbjct 1573 ATAACCAGAAGTA 1561 >seq5424 Length=365 Score = 147 bits (162), Expect = 2e-33 Identities = 151/194 (78%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 2 TACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG 61 || |||||||||||| |||||| ||||||||||| |||| ||||||| | || ||| Sbjct 40 TAACTGAAGCTTAGAGACTTTTCCTGGAAGCATGGTATCAGCCACTTCAC--TGTACAAG 97 Query 62 -ATAACTCGTCATCAGCTCCCGGCCTT-AGAATCCCGGATTTACCTAAGATTCCAGCCTA 119 | | || | ||||| || | || | || | ||||||||| |||||||| | ||||| Sbjct 98 TACAGCTTGCTATCAGTTCTCAGCATAGAGTACCCCGGATTTGCCTAAGATACATGCCTA 157 Query 120 CCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGC 179 | ||||| || |||||||||||||||| |||| | || |||||||||||| |||||| Sbjct 158 CAACCTTCCACCTGGACAACCAACGCCAGGCTGACTTAACCTTCTCCGTCCTCTCATCGC 217 Query 180 ATTAACCAGAAGTA 193 |||| |||||||| Sbjct 218 ATTACACAGAAGTA 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518360958972