Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq606 372 8e-101 seq54 293 6e-77 seq2108 190 5e-46 seq204 143 7e-32 seq6 91.5 4e-16 seq2442 86.0 2e-14 seq6876 78.8 2e-12 seq5871 75.2 3e-11 >seq606 Length=289815 Score = 372 bits (412), Expect = 8e-101 Identities = 324/401 (81%), Gaps = 1/401 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 461 AGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTT 402 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||| ||||||||||||||||| || |||||| |||| |||| ||||||||| Sbjct 401 GTTCGGATTTACTGGGCGTAAAGCGCACGTAGGCGGACTATTAAGTCAGGGGTGAAATCC 342 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||||| |||| |||| ||| |||| |||| | || |||| | ||||| | || Sbjct 341 CGGGGCTCAACCCCGGAACTGCCTTTGATACTGGTAGTCTTGAGTTCGAGAGAGGTGAGT 282 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| ||||||||| |||||||||||| |||||||||| Sbjct 281 GGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAGTGGCGAAGGC 222 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || | |||| | ||||||||| | | ||||||||||||||||||||||||||||| Sbjct 221 GGCTCACTGGCTCGATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 162 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTTACTTCCTTG 368 ||||||||||||||||||| |||||||| |||||||| |||||| | || ||| Sbjct 161 TACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGAGCCTTGAGCTCTTA 102 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || ||||||||| | |||||||||||||||||| ||| Sbjct 101 GTGGCGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTAC 61 >seq54 Length=99412 Score = 293 bits (324), Expect = 6e-77 Identities = 266/335 (79%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 13964 TACCATAAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 13905 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||| ||| |||| ||||| ||||| |||||| | | |||| ||| || Sbjct 13904 AAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTTTTTAAGTCAGTGGT 13845 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| | ||||||| | ||| ||| ||| |||| | || |||| ||| Sbjct 13844 GAAATCCTAGTGCTTAACATTAGAAATGCCATTGAAACTGGAGAGCTTGAGTCAAGGAGA 13785 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | ||||| ||||||||||||||||| |||||| ||||| |||||| | Sbjct 13784 GGTAAGCAGAATTTATGGTGTAGCAGTGAAATGCTTAGATACCATAAGGAATACCAATAG 13725 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||||| |||| | ||||||||| | ||||||||||||||||||||||||| Sbjct 13724 CGAAGGCAGCTTACTGGCCTTGTACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAG 13665 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||| ||||||||||||||||| |||||||| Sbjct 13664 GATTAGAGACCCTGGTAGTCCACGCTGTAAACGAT 13630 >seq2108 Length=210 Score = 190 bits (210), Expect = 5e-46 Identities = 168/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 78 TTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTT 137 ||||||||||||||||| ||| ||| || |||| || ||||||||||||| |||| Sbjct 210 TTACTGGGCGTAAAGCGCGCGTAGGTGGCCAATTAAGTCAAATGTGAAATCCCCGAGCTT 151 Query 138 AACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCC 197 ||| ||||||||||||| | |||| | ||||||| || ||||| ||| ||||||| Sbjct 150 AACTTGGGAATTGCATTCGATACTGGTTGGCTAGAGTATGGGAGAGGATGGTAGAATTCC 91 Query 198 ACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCT 257 | ||||||| |||||||||||||| || |||||||| ||| ||||||||||||||| || Sbjct 90 AGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGATGGCGAAGGCAGCCATCT 31 Query 258 GGGATAACACTGACGCTCATGCACGAAAGC 287 || ||| |||||| || | | ||||||| Sbjct 30 GGCCTAATACTGACACTGAGGTGCGAAAGC 1 >seq204 Length=6015 Score = 143 bits (158), Expect = 7e-32 Identities = 131/163 (80%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 125 AATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAGAG 183 |||||||||||| |||||||||| |||||| |||| |||| ||||||| || |||| Sbjct 5854 AATCCCCGGGCTCAACCTGGGAACTGCATTCAAAACTG-ACGAGCTAGAGTATGGTAGAG 5912 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 || ||||||||| | ||||||| ||||||||||||||||| | |||||||||| |||| Sbjct 5913 GGTGGTGGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGC 5972 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 |||||| || ||||| | | |||||| || | | |||||| Sbjct 5973 GAAGGCGACCACCTGGACTGATACTGACACTGAGGTGCGAAAG 6015 >seq6 Length=53452 Score = 91.5 bits (100), Expect = 4e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 || |||| |||||||| | |||||||||||||||||||| ||| |||| |||||| ||| Sbjct 52491 AAAAAGCCCCGGCTAATTTCGTGCCAGCAGCCGCGGTAAAACGGAGGGGGCAAGCATTAT 52550 Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT 106 ||| | | ||||||||||| || | ||||||| Sbjct 52551 TCGTTAGGATTGGGCGTAAAGGGTAAGTAGGCGGT 52585 >seq2442 Length=2623 Score = 86.0 bits (94), Expect = 2e-14 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 88 TAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAA 147 ||||| ||||| |||||| | |||| |||| |||||| | |||| |||| | | Sbjct 203 TAAAGGGTGCGTAGGCGGCTTATTAAGTCAGGGGTGAAAGACGGTGGCTCAACCATCGCA 144 Query 148 TTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGC 206 ||| ||| |||| | || || || | ||||| || ||||| || ||||| Sbjct 143 GTGCCCTTGATACTG-ATGAGCTTGAATACACTAGAGGTAGGCGGAATGTGACAAGTAGC 85 Query 207 AGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACA 266 ||||||||| ||||||||| ||||||| || ||||||||||| || | | | Sbjct 84 GGTGAAATGCATAGATATGTCACAGAACACCGATTGCGAAGGCAGCTTACTATGGTGTTA 25 Query 267 CTGACGCTCATGCACGAAAGCGTG 290 ||||||| | ||||||||||||| Sbjct 24 TTGACGCTGAGGCACGAAAGCGTG 1 >seq6876 Length=365 Score = 78.8 bits (86), Expect = 2e-12 Identities = 66/81 (81%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 22 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC 81 |||||| | |||||||||||||||||||| ||| |||| || ||| ||| ||| || | Sbjct 1 GGCTAATTTCGTGCCAGCAGCCGCGGTAAAACGGAGGGGGCGAGCATTATTCGTAAGGAT 60 Query 82 TGGGCGTAAAGCGTGCGCAGG 102 ||||||||||| || || ||| Sbjct 61 TGGGCGTAAAGGGTACGTAGG 81 Score = 78.8 bits (86), Expect = 2e-12 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 267 CTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACG 326 ||||| || | | ||||| || | |||||||||||||||||||||||||||||||| | | Sbjct 247 CTGACACTGAGGTACGAAGGCATAGGGAGCAAACAGGATTAGATACCCTGGTAGTCTATG 306 Query 327 CCCTAAACGAT 337 | |||||||| Sbjct 307 CAGTAAACGAT 317 >seq5871 Length=500 Score = 75.2 bits (82), Expect = 3e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 9 AAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGT 68 ||||| ||| |||||||| | ||||||||| |||||||||||||| |||| |||||| | Sbjct 76 AAGAAGAAGTCCCGGCTAATTTCGTGCCAGCCGCCGCGGTAATACGGAGGGGGCAAGCAT 17 Query 69 TAATCGGAA 77 || ||| || Sbjct 16 TATTCGTAA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289499746496