Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq116 334 1e-89 seq2 75.2 2e-11 >seq116 Length=14452 Score = 334 bits (370), Expect = 1e-89 Identities = 227/251 (90%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||| | | Sbjct 3842 CAACAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCTTGT 3901 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||| ||| |||||||||||| |||||| ||||||||||| Sbjct 3902 TAGTGGGTGAACAATCCAACACTTTGTGAATTCTGCTTCACAATGATAAGAAGAGCCGAC 3961 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 3962 ATCGAAGGATCAAAAAGCAGCGTCGCTATGAGCGCTTGGCTGCCACAAGCCAGTTATCCC 4021 Query 212 TGTGGTAACTTTTCTGGCACCTCTAG-CCTCAAATTTCGAGGGAC-TAAAGGATCGATAG 269 |||||||||||||||| ||||||||| ||| | |||| ||| || |||||||||||||| Sbjct 4022 TGTGGTAACTTTTCTGACACCTCTAGACCTAAGATTT--AGGTACATAAAGGATCGATAG 4079 Query 270 GCCACACTTTC 280 ||| | ||||| Sbjct 4080 GCCCCGCTTTC 4090 >seq2 Length=124989 Score = 75.2 bits (82), Expect = 2e-11 Identities = 126/181 (70%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| Sbjct 3147 ACCAAACTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGC 3206 Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 ||||| ||| ||| |||| | | | ||| || ||||||||||||| | || Sbjct 3207 CCAACCCTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCA 3263 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 || | ||||||| || ||||||| | | |||| |||||||| ||| |||| Sbjct 3264 AACCTCCCCGTCGCTTTGGGCGCTTGGGAGAGATTAGCCTGTTATCCCCAGAGTACCTTT 3323 Query 224 T 224 | Sbjct 3324 T 3324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854333578944