Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001151.1 Length=269 Score E Sequences producing significant alignments: (Bits) Value seq2141 273 3e-71 >seq2141 Length=6827 Score = 273 bits (302), Expect = 3e-71 Identities = 229/269 (85%), Gaps = 9/269 (3%) Strand=Plus/Plus Query 2 CCGCAGAAACGCCGGGTTTCCACAGGCGTACCGGCGCCGGCCCCTTCGCCCTTCGGGCAG 61 ||||| |||||||||||| |||||| | |||||||| |||||||| |||||| ||||| Sbjct 1469 CCGCA-AAACGCCGGGTT-CCACAGATGCACCGGCGCGGGCCCCTT-GCCCTT-GGGCAA 1524 Query 62 TTCGGGCCAACAGATCGTTCGGCCTTCGGCGGAATCGGTCATAGGGCATCTCC-TGTGTC 120 || | ||||||| || || |||||| ||| ||||||||||| | | |||| |||||| Sbjct 1525 TT-GCGCCAACAACTCATT-GGCCTT-GGCCGAATCGGTCATGCTGTA-CTCCTTGTGTC 1580 Query 121 TTACTGATCGCTCATGCCCAGCAGGCCACGGGCGTATTTGGCCAGGGGGCGGGCGATCAG 180 |||||||||||||||||||| ||||| || ||||| | |||||||| | ||||||| Sbjct 1581 TTACTGATCGCTCATGCCCAACAGGCTGCGCGCGTAGTGCGCCAGGGGCTTGCCGATCAG 1640 Query 181 GTCTTCTGGCTTGTTGTCGTGGAACGTCAGTAAACCGCCACGGCTGCGAATACGCACAGT 240 ||| ||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct 1641 GTCATCTGGCTTGTTGTCGTGGAACGTCAGTAAACCGCCACGGCTATGGATGCGCACAGT 1700 Query 241 ATCAATCAAATACTGGGTGCTGGTCTCGA 269 |||||||||||||||||| |||||||||| Sbjct 1701 ATCAATCAAATACTGGGTACTGGTCTCGA 1729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 761542643428