Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq2905 295 1e-77 >seq2905 Length=6907 Score = 295 bits (326), Expect = 1e-77 Identities = 209/238 (88%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 3 AGGCGCAAGCGGTACAGGCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGAT 62 |||| || ||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 2760 AGGCTCAGGCGATACAGGCGACGCTTGAG-TTTGCCCAAATACTGCATGCGCGCGACGAT 2818 Query 63 TTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAG 122 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2819 TTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCTTGCAGGTTGAG 2878 Query 123 CATTTGCGGGATGAACAGCTCGCGGGTTTGCGCCATGACCTGGCCGATGCCGGCGCGGGT 182 ||| |||||||||||||| |||||||| || | ||||||||||||||| ||||| ||| | Sbjct 2879 CATCTGCGGGATGAACAGTTCGCGGGTCTGGGGCATGACCTGGCCGATACCGGCACGGAT 2938 Query 183 CTGGCCCAGCAGCCATTCGTTCAGACCTGCTTCTTTAAGCTGTGCAGTCAATTGGCTG 240 ||||||||||||||||| |||||| | |||| | | ||||| | | ||||||| Sbjct 2939 CTGGCCCAGCAGCCATTGGTTCAGTTCACCTTCGTGCAATTGTGCGGCGAGTTGGCTG 2996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735944571380