Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001228.1 Length=576 Score E Sequences producing significant alignments: (Bits) Value seq4743 500 3e-139 >seq4743 Length=1063 Score = 500 bits (554), Expect = 3e-139 Identities = 467/594 (79%), Gaps = 22/594 (4%) Strand=Plus/Plus Query 3 ACCCCGAGGTCACGGCGGCCGACCTGAAGCTGGCCCTGGCCGAGATGGAGCAGTTCTACG 62 |||||| | ||| || | ||||| |||| |||||| |||||| ||||||||| | Sbjct 155 ACCCCGGGATCAGCGCCGAGGACCTCAAGCAGGCCCTCGCCGAGCGCGAGCAGTTCCTGG 214 Query 63 ACGTGCAACCGTCTGAGCTTGAGCAGCTCGATCCACGCG-GCGCAGGGCCATGCACGGCG 121 |||| ||| ||||| || |||| |||||| || ||| || | |||| ||||| Sbjct 215 ACGTTACCCCGCAGGAGCTGGAAGAGCT-GATCCAGGCCAGCG-AGCGGTATGCCCGGCG 272 Query 122 GCGCAGCATCGGCGAGGTGCTCAGTCGCCGTG-------------------CATAAATGC 162 ||||| |||||||| ||| || |||| | || |||||| Sbjct 273 GCGCACCATCGGCGCGGTTTTCCAGCGCCAGGGCCAGCCTCCTCCATAAGGCAAAAATGC 332 Query 163 AATAACGACCTGCAGGATTCCCCGGTGTACTGGGCAAATGTGCACTGGTAGGATCGCAAG 222 || ||||||||||| |||||| |||||||||||||| |||||||||| |||||| || Sbjct 333 AAAAACGACCTGCATGATTCCGACTTGTACTGGGCAAATTTGCACTGGTACGATCGCGAG 392 Query 223 AAGGTTCGTCCCCGAACATCTTGATAAAGAACAATAAAAGCAGGGAGTTAGCGATGACTG 282 | |||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 393 ATGGTTCGCCCGCGAACATCTTGATAAAGAACAATAAAAGCAGGGAGTTAGAGATGACTG 452 Query 283 CTCAGGTTTCATCCGAGGCAAGCCACACCGACCATCTTCAAGCCGACATACTCGCCGAAG 342 ||||||||||||||||||||||| | ||| | | |||| ||| | || || | | Sbjct 453 CTCAGGTTTCATCCGAGGCAAGCAGCGCCGGGATTGTGCAAGACGAGGTCCTGGCGCACG 512 Query 343 TCCGCAACCATATCGGCCACCTCACCCTCAACCGCCCCGCCGGCCTGAACGCCATTACCC 402 | ||||||||||| |||||||| |||||||| |||||||| ||||| |||||| | |||| Sbjct 513 TACGCAACCATATTGGCCACCTGACCCTCAATCGCCCCGCAGGCCTTAACGCCCTCACCC 572 Query 403 TGGACATGGTCCGCAGCCTGAGCCACCACCTGCAGGCCTGGGCCGACGATCCCACGGTGT 462 ||||||||||||||||||| |||| || ||||||| ||||| ||||||||| |||| Sbjct 573 TGGACATGGTCCGCAGCCTCAGCCGGCATTTGCAGGCGTGGGCGGACGATCCCCAGGTGC 632 Query 463 ATGCCGTGGTCCTGCGCGGCGCCGGGGAAAAAGCCTTCTGCGCGGGCGGCGATATCCGTT 522 |||||||||| ||||||| ||||| ||||||||||||||||| |||||||| || || | Sbjct 633 ATGCCGTGGTGTTGCGCGGTGCCGGTGAAAAAGCCTTCTGCGCCGGCGGCGACATTCGCT 692 Query 523 CCTTGCATGACAGTTTCAAGAGCGGCGACACCCTGCACGAAGACTTCTTTGTCG 576 | || | ||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct 693 CGCTGTACGACAGCTTCAAGAGCGGCGACACCCTCCACGAAGACTTCTTCGTCG 746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1740664670208