Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001250.1 Length=167 Score E Sequences producing significant alignments: (Bits) Value seq1722 187 2e-45 >seq1722 Length=10095 Score = 187 bits (206), Expect = 2e-45 Identities = 144/166 (87%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 1 TCGACCCTAACCTGTGCACCCAGTGCGTCGGTCACTACGACGAACCGCAGAGCCAGCAGG 60 ||||||| ||||||||||||||||| ||||| |||||||||||||| ||| ||||||||| Sbjct 217 TCGACCCCAACCTGTGCACCCAGTGTGTCGGCCACTACGACGAACCCCAGTGCCAGCAGG 276 Query 61 TATCGCCCGGTGGATTCGCATTTCCGCTGGACGAGGCACACCCCGAGACGGAAGAGCAGT 120 | | |||||||||||| ||| |||||||||||||||| || || || ||||||||||| Sbjct 277 T-TTGCCCGGTGGATT-GCA-TTCCGCTGGACGAGGCTCATCCGGAAACGGAAGAGCA-A 332 Query 121 TTGATGGAGAAGTACCGCAAGATTACCGGTAAGGCCTAAGCCTCTT 166 |||||||||||||||| ||||||||| |||||||||| | ||| Sbjct 333 CTGATGGAGAAGTACCGGTTGATTACCGGGAAGGCCTAAGTCCCTT 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 435167224816