Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001262.1 Length=237 Score E Sequences producing significant alignments: (Bits) Value seq3812 286 5e-75 >seq3812 Length=3332 Score = 286 bits (316), Expect = 5e-75 Identities = 195/213 (92%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 24 TCGAGATCCAGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGGCCGAATGGCGTC 83 |||||||| |||||||| |||||||||||||| |||||||||||||| |||| ||||||| Sbjct 276 TCGAGATC-AGGAACGCAGCGGTCTTGCCGGTACCGGTCTGGGCGCGACCGA-TGGCGTC 333 Query 84 TTTTGCCGGCCAGGGTGAAACCCAGCACCTAGCGCCTTGGATCGGCGTGCAGTACGGGAA 143 ||| |||||| |||||||| |||||||| | |||||| |||||||||||||||||||||| Sbjct 334 TTT-GCCGGCGAGGGTGAAGCCCAGCACTT-GCGCCT-GGATCGGCGTGCAGTACGGGAA 390 Query 144 ACCCAGGTCCTGGATGGCGTGCATCAGTTCCGGGGCCAGTTTGAAATCGTGGAAGCGGGT 203 |||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct 391 ACCCAGGTCCTGAATGGCGTGCATCAGTTCCGGGGCGAGTTTGAAATCATGAAAGCGGGT 450 Query 204 CTTGCCTTCCTGGGGCTCGACGACGAAGTCTTC 236 |||||||||||||| ||||| ||||||||||| Sbjct 451 TTTGCCTTCCTGGGGTTCGACAACGAAGTCTTC 483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 659150355236