Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001277.1 Length=476 Score E Sequences producing significant alignments: (Bits) Value seq4788 697 0.0 >seq4788 Length=2991 Score = 697 bits (772), Expect = 0.0 Identities = 439/474 (93%), Gaps = 0/474 (0%) Strand=Plus/Minus Query 1 CGACCCGCTGCAAGACGGCACCGACCTGCTGTTTCGCATCGGCGTGCTGAACGATTCCGG 60 ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 2441 CGACCCGTTGCAAGACGGCACAGACCTGCTGTTTCGCATCGGTGTGCTGAACGATTCCGG 2382 Query 61 CATGCAAGCGCGAATCTTCGCCCCGCAGCGCCTCCGCCTTGCGGCCAGCCCCGGCTACCT 120 |||||| ||||||||||||||||| |||||| | || || || |||||||||||||| || Sbjct 2381 CATGCAGGCGCGAATCTTCGCCCCCCAGCGCTTTCGTCTCGCTGCCAGCCCCGGCTATCT 2322 Query 121 GGAACGTTTCGGTACGCCGCGCCATCCGGACGAACTGGTGAACCACCAGTGCCTGGCCTA 180 ||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 2321 GGAGCGTTTCGGTACGCCCCGGCATCCGGACGAACTGGTGAACCACCAGTGCCTGGCCTA 2262 Query 181 CAAGGGTGTCACCGGCCAACAACGCTGGTTCTTCCGCCGCGACCAGGACGACTGGACGTC 240 |||||| ||||||||||| || ||||||||||||||||| ||||||| |||||||||||| Sbjct 2261 CAAGGGCGTCACCGGCCAGCAGCGCTGGTTCTTCCGCCGGGACCAGGGCGACTGGACGTC 2202 Query 241 CTACAGCGTCAAGGGCCCGATCACCGGCAACCACGCCGACACTCTGACCCACGCCGCCGA 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 2201 CTACAGCGTCAAGGGCCCGATCACCGGCAACCACGCCGACACCCTGACCCACGCTGCCGA 2142 Query 301 GCAAGGCCTGGGGCTGGTGGTGTTTCCATCTTGGTTGATCGGCGAAGGGCTGCGTGCCGG 360 ||||||||||||||||||||||| || || ||||||||||| ||||| ||||| ||||| Sbjct 2141 ACAAGGCCTGGGGCTGGTGGTGTTCCCGTCATGGTTGATCGGTGAAGGCCTGCGCGCCGG 2082 Query 361 CACGCTGCAGGCGGTGCTGACCGACTACGAAGTGGCGACGACCCTGGAGCCGCAACAGAT 420 |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||| Sbjct 2081 CACGCTGCAGGCGGTGCTCAGCGACTATGAAGTGGCGACGACCCTGGAGCCGCAACAGAT 2022 Query 421 TGCGGCGCTGTGGCCGGGTAGTCGGCGGTTGTCGTTGAAGGTGCGGACGGTGAT 474 ||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||| Sbjct 2021 TGCTGCGCTGTGGCCGGGTAGCCGGCGGCTGTCGTTGAAGGTGCGGACCGTGAT 1968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1420689547008