Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001286.1 Length=411 Score E Sequences producing significant alignments: (Bits) Value seq2547 540 2e-151 >seq2547 Length=3835 Score = 540 bits (598), Expect = 2e-151 Identities = 331/352 (94%), Gaps = 0/352 (0%) Strand=Plus/Plus Query 60 GTCATAAGGGTCCACGCCGTCCTTGACCACCAGGATGTCTTCCATGATCAGGTATTGCAG 119 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 686 GTCATAAGGGTCTACGCCGTCCTTGACCACCAGGATGTCTTCCATGATCAAGTACTGCAG 745 Query 120 GTCGGAGCCAAAGAACATGTCCAGCGCGTCTTTCGGCGAGCAGATCATCGCTTCGCCACG 179 |||||| || |||||||||| |||||| || |||||||||||||||||||||| ||||| Sbjct 746 GTCGGAACCGAAGAACATGTTCAGCGCATCAGTCGGCGAGCAGATCATCGCTTCACCACG 805 Query 180 GCGGTTGAGCGAGGTGTTCAGGGACACGCCGTTGCCGGTCAGCACTTCCAGCTCTTTCAT 239 |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 806 ACGGTTGAGCGAGGTGTTCAGCGACACGCCGTTGCCGGTCAACACTTCCAGCTCTTTCAT 865 Query 240 CATGTCGTAGTAGCGCGGGTTGTATTCGCGCTTGAGCACCTGGGCGCGGGAGGTGCCATC 299 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct 866 CATGTCGTAGTAGCGCGGGTTGTATTCGCGCTTGAGCACTTGGGCACGGGAGGTACCATC 925 Query 300 TTCATGGACCACTTCCGGCACGCGGGTCTTCCACTCTTCCGACACTTCAAAGGTGAAGGT 359 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 926 TTCATGGACCACTTCCGGCACGCGGGTTTTCCACTCTTCCGACACTTCAAAAGTGAAGGT 985 Query 360 CATGAACGGCGCCGGGTGATCGACCTTGATCATCTGCGGGGCCACGGTGTCG 411 |||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct 986 CATGAACGGCGCCGGGTGATCGACCTTGATCATCTGTGGCGCAACGGTGTCG 1037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1212705716928