Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001383.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value seq6660 529 6e-148 >seq6660 Length=1942 Score = 529 bits (586), Expect = 6e-148 Identities = 456/562 (81%), Gaps = 2/562 (0%) Strand=Plus/Minus Query 1 TCGACCCTGATTTTAAACACGGTCTGGGCATATTTGCGCCCAATCCCACTTTATAGTGCT 60 ||||||| || || || |||| || ||||||| || ||||||| | | || Sbjct 833 TCGACCCAGAAGTTGCCCAAAGTCTTGGTGGATTTGCGACCGATCCCACGGCACAACGCG 774 Query 61 TACCATCACGGACAGGACTGTCGCGTTGTTGACGAAGTTCTGCTCCGTGAGGACGGCCAT 120 |||| |||| ||| | || ||| |||||||||||||| | |||||| || |||| Sbjct 773 -ACCAGTACGGCGAGGCCGGTGGCGGCACTGACGAAGTTCTGCACGGTGAGGCCGACCAT 715 Query 121 CTGACTTAGATAATTTAAGGACGCCTCACCGCTGTTGTTCTGCCAGTTGGTATTGGTCAT 180 |||||| || || | | |||||| |||||||||| ||||||||||||||| |||||||| Sbjct 714 CTGACTGAGGTAGCTCAGGGACGCTTCACCGCTGTAGTTCTGCCAGTTGGTGTTGGTCAT 655 Query 181 GAAACTGACGGCGGTATTAAACGCCTAGGTCCATTCCTGGCCCGGCAGGTTTTGCGGGTT 240 |||||||| |||||| || |||||| |||||||||||| ||||||| || |||||||| Sbjct 654 GAAACTGATGGCGGTGTTGAACGCCAGGGTCCATTCCTGACCCGGCAATTTCTGCGGGTT 595 Query 241 CAGCGGGAGGGAGCCTTGAAATAACAGAATAGAGAACAGCAGCAGGAAGCCGGCGAGGTT 300 |||||| ||| | | || || | ||| || | ||||||||||| ||| ||||| ||||| Sbjct 594 CAGCGGCAGGTATTCCTGGAACAGCAGGATCGCGAACAGCAGCACGAAACCGGCAAGGTT 535 Query 301 GAATGCGAGCAAGGCCAGCATGTACTTCTGCCAGCTTTGTTCCTGCTGTGCGTCCACACC 360 ||| || ||||| |||||| ||| ||||||||||| |||||||| | || || ||||| Sbjct 534 GAACGCCAGCAACGCCAGCGCGTATTTCTGCCAGCTCTGTTCCTGGTCCGCATCGACACC 475 Query 361 CGACAGGCGATAACAGGCGCTTTCCACCGGCCCCAGCACCGGGCTGAGCCAGGTGCGCTG 420 ||| |||||||| || ||| || ||||| || | |||||| |||||||||| ||||| Sbjct 474 CGAAAGGCGATAGCACACGCGCTCGACCGGGCCGAACACCGGCGTGAGCCAGGTTCGCTG 415 Query 421 GCCCTCCATCACCTTGTAGTAGAACCGCCCCAGGAACGGAGTCGGCACCAGTACCACGGC 480 || ||||| |||||||||||||||||||||||| ||| | ||| | ||| |||| ||| Sbjct 414 CCCTTCCATTACCTTGTAGTAGAACCGCCCCAGGGCCGGTGCCGGAATCAGCACCAAGGC 355 Query 481 AAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCC-GCTCCTAGTTCCGATC 539 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 354 AAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCCTGCTCCTAGTTCCGATC 295 Query 540 CGCGCGTAACAGCGCAACCAGC 561 |||||||||||||||||||||| Sbjct 294 CGCGCGTAACAGCGCAACCAGC 273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1692668401728