Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq1431 280 2e-73 >seq1431 Length=18456 Score = 280 bits (310), Expect = 2e-73 Identities = 181/198 (91%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 1 CGACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 60 |||| || ||||| ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 12947 CGACTTTCTTGCTGGCCTTCAGGCGACGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 12888 Query 61 CCAGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAG 120 ||||||||| ||| || || ||||||||||||||||||||||| ||||||||||| || | Sbjct 12887 CCAGGCCCAATTCAGGGTGTTCGTTGAGCCACAGGCTGAAGGCATCCTTGACCACCCCGG 12828 Query 121 AGACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCG 180 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 12827 AGACGAACGCCGCTGCCTCACGGGACGACAGGCGCTCCTTGGTCTGGCCGGAGAATTGCG 12768 Query 181 GTTCCTGCATCTTCATCG 198 | |||||||| ||||||| Sbjct 12767 GCTCCTGCATTTTCATCG 12750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534359754002