Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001448.1 Length=310 Score E Sequences producing significant alignments: (Bits) Value seq2764 361 1e-97 >seq2764 Length=3251 Score = 361 bits (400), Expect = 1e-97 Identities = 267/309 (86%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 1 CGACCTGTTTGACAGTGACGCCCGGGCGTGGGGCGAGCTTGTCGGTATTGCGGGCGATGG 60 |||| || ||| | |||||||| ||||| | | ||| |||||||||||| || ||||||| Sbjct 3172 CGACTTGCTTGGCGGTGACGCCAGGGCGCGCGCCGATCTTGTCGGTATTACGTGCGATGG 3113 Query 61 CGGTGACGGTATGCCCACGACGCAGCGCTTCTTCCAGCAGTTGGCTACCGGCACGGCCGG 120 | |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 3112 CCGTGACGGTGTGCCCGCGACGCAGCGCTTCTTCCAGCAGTTGGCTACCGGCACGACCGG 3053 Query 121 TGGCACCAATGATTGCAATCTTGCTCATGACGTTCTCCAGTTCG-TTAAGGGTTTAAAAC 179 |||||||||||||||| |||||||||||||||||||||||| || ||||||||| || | Sbjct 3052 TGGCACCAATGATTGCGATCTTGCTCATGACGTTCTCCAGTACGGTTAAGGGTTGAAT-C 2994 Query 180 CATTCACCACTTCATTTCGCCCTTGGCGACTTTGGCGCTGAGTTCCAGCGAGCTTTCGTC 239 | |||||||| |||||||||||||||||||||||||| |||||||| | ||| ||||| Sbjct 2993 AACTCACCACTGCATTTCGCCCTTGGCGACTTTGGCGCCCAGTTCCAGGGTGCTCTCGTC 2934 Query 240 GGCGAGGGTCGGGTAACGCTTTTTCATGGCCGCGATCAGGGCCGCGGAATCCTTCGCTTT 299 | ||| ||||||||||||||| ||| ||||| |||||||| ||||| ||||| || || Sbjct 2933 ACCCAGGTTCGGGTAACGCTTTTGCATCGCCGCAATCAGGGCGGCGGAGTCCTTGGCCTT 2874 Query 300 GGCCGTCTC 308 ||| || || Sbjct 2873 GGCGGTTTC 2865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 889530842496