Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001493.1 Length=345 Score E Sequences producing significant alignments: (Bits) Value seq2387 120 6e-25 >seq2387 Length=812 Score = 120 bits (132), Expect = 6e-25 Identities = 149/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 146 ATTGCAGGCGCACGGCTTTGTTGTCGACGCGGTCGTAATCCTTGTCGTCGTAGACGTTCT 205 |||||||||||||||| || |||| ||| | |||| | |||||| | ||| | Sbjct 1 ATTGCAGGCGCACGGCCTTTTTGTTGACTTCGCCGTAGGTGTGATCGTCGATCAGGTTTT 60 Query 206 TGATAAAACCGTCGCGCTCCTTGGAATACAGCGACACGCGGGCGGCCAGGCGGTCTTCC- 264 | ||||||||||| |||| ||| |||||||| | || || || | | | |||| Sbjct 61 TCTGGAAACCGTCGCGTTCCTCGGAGTACAGCGAGATCCGCGCCGC---GAGTTTTTCCG 117 Query 265 --ACCAGGGTGCCGCCGATGGCGCCATTGACGATTTTCTCGTTCTTGCTGCCGTAGCCAA 322 ||||||||||||||||||||||| |||||||| |||||||||||||| | || | Sbjct 118 GAACCAGGGTGCCGCCGATGGCGCCGTTGACGATGCGTTCGTTCTTGCTGCCAAAACCGA 177 Query 323 GGGTGGCGTAGCCGTCGTTCTCG 345 ||| | ||||||||| | ||| Sbjct 178 TCGTGCCATAGCCGTCGGTGTCG 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1001522135616