Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001503.1 Length=170 Score E Sequences producing significant alignments: (Bits) Value seq3888 223 3e-56 >seq3888 Length=2482 Score = 223 bits (246), Expect = 3e-56 Identities = 152/170 (89%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 1 GTCAAGTTTCTACAAAAACGCCATGGGCGCCGGTATCAAGCCGATCTGCGGCGCCGACCT 60 |||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||| Sbjct 2344 GTCAAGTT-CTACAAGGCCGCCATGGGCGCCGGCATCAAGCCGATCTGCGGTGCCGACCT 2286 Query 61 GTGGCTGTCCAACAAAGACCCGGACAACGCCCTGAGCCGCATCGGCCTGCTGGCGATGAA 120 ||||||||| ||||| |||||||| ||| | |||||||||||| ||||| |||||||||| Sbjct 2285 GTGGCTGTCGAACAAGGACCCGGATAACCCACTGAGCCGCATCAGCCTGTTGGCGATGAA 2226 Query 121 CGGTGTTGGTTACCGCAACCTCACCGAGCTGATTTCCCGTGGTTTCATCG 170 ||| || |||||||||||||||||||| |||||||||||||| || |||| Sbjct 2225 CGGCGTGGGTTACCGCAACCTCACCGAACTGATTTCCCGTGGCTTTATCG 2176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444766501834