Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq1035 417 2e-114 >seq1035 Length=9025 Score = 417 bits (462), Expect = 2e-114 Identities = 308/359 (86%), Gaps = 0/359 (0%) Strand=Plus/Plus Query 1 CGAAGTTCGGCACCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 60 |||| || || ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3977 CGAACTTGGGTTCCTGGCGCAAGGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAAT 4036 Query 61 ACATGTAGCACACGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGC 120 |||||||||| || ||||||||||| || |||||||||||||||||||||||||| |||| Sbjct 4037 ACATGTAGCAGACATAACCGCTGCAGAAGCCGCAGAAGTTGCACGGGCCCATCTGGGCGC 4096 Query 121 CATAGGGGTTGGTGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAAC 180 | || |||||||||||||||||||| ||||| || || |||||||||||||| ||||| | Sbjct 4097 CGTAAGGGTTGGTGTACGGCCCCGATGTATTCGCGGAAGGCAGGTTGTAGGGCTTGTACC 4156 Query 181 CGACCTCGGCAGCGGCTTTCTGAAACAGCTGTGCGGAGACGGTGTTTTTCTGCGATTCCA 240 | || | | ||||| ||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct 4157 CCACGGCCGTGGCGGCCTTCTGGAACAGCTGTGCGGAGACTGTGTTCTTCTGCGATTCCA 4216 Query 241 AGGGGAACGGGTTGGAGCGGTCCGGGGCATACGGGTTGCCACCGCGACCTTCGCCCACCA 300 ||||| | |||||||| ||||| || || |||||||| || ||||||||||||| Sbjct 4217 GCGGGAAGTGATTGGAGCGATCCGGTGCGTAAGGGTTGCCGCCCTTGCCTTCGCCCACCA 4276 Query 301 ACTGGCCTTTGACGGTCCAGGCCTGGCCGGAGGTGCCGAAGACTTTTTCCGCGTAGTCG 359 |||| ||||| || |||||||| || |||||||||||||||||||| || || |||||| Sbjct 4277 ACTGACCTTTCACCGTCCAGGCTTGCCCGGAGGTGCCGAAGACTTTCTCGGCATAGTCG 4335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046318652864