Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001569.1 Length=509 Score E Sequences producing significant alignments: (Bits) Value seq6655 405 2e-110 >seq6655 Length=1206 Score = 405 bits (448), Expect = 2e-110 Identities = 313/372 (84%), Gaps = 0/372 (0%) Strand=Plus/Plus Query 62 ATTTCGGTGACCGGCCAGGATGTGCTGCCCAAGTTGCAGGCCCAGGCTGAAGCTGCTGTG 121 ||| |||||||||| ||| |||||||||||| |||| |||||||| ||||| || ||| Sbjct 3 ATTACGGTGACCGGTGCGGACGTGCTGCCCAAGCTGCAAGCCCAGGCCGAAGCGGCCGTG 62 Query 122 CGTTTGTTGGGCTTTACGCCGACCAACTCGCCAGGCGTACCACAACTGACCGTGACCCTG 181 || |||||||||| || || ||||||||||||| | |||||||||||| | |||||| Sbjct 63 CGCCTGTTGGGCTTCACCCCTTCCAACTCGCCAGGTGCGCCACAACTGACCATCACCCTG 122 Query 182 GCCGAGCTTAAATACCAGTCGCCCAAAGACGGCCTGTATGTGACCGAGGCTTCCATCGGC 241 |||||||| || || ||||||||||| || |||||||| ||||| || || |||||||| Sbjct 123 GCCGAGCTGAAGTATCAGTCGCCCAAGGAAGGCCTGTACGTGACTGAAGCCACCATCGGC 182 Query 242 GCCACCTTCAAGTCTGACGTCAGTGCCGGCACCCGCCGTTACAGTGGCCGCTACGCCGCC 301 || ||||||||||| ||||| | |||||| ||||| || ||||| ||||| |||| ||| Sbjct 183 GCGACCTTCAAGTCCGACGTGACTGCCGGTACCCGTCGCTACAGCGGCCGTTACGGCGCA 242 Query 302 TCGCTCAACCAGCGTTTCGGCATGTCGCCCAACCAGGAAACCAACACCAAGCTGGTCAGC 361 || || ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 243 TCCCTGGACCAGCGCTTCGGCATGGCGCCGAACCAGGAAACCAACACCAAGCTGGTCAGC 302 Query 362 GACGTGCTCAGCGATGCCCTGACCCGCCTGTTCAAGGACCCAAGCATCGGCCAACTGCTC 421 |||||| | |||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct 303 GACGTGTTGAGCGATGCCCTGACGCGCCTGTTCAAGGACCCGAGCATCGGTTCGCTGCTC 362 Query 422 AGCGCGCAATAA 433 || |||| ||| Sbjct 363 AGTTCGCAGTAA 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1526281337664