Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001575.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq4885 163 4e-38 seq4886 73.4 6e-11 >seq4885 Length=319 Score = 163 bits (180), Expect = 4e-38 Identities = 142/175 (81%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 87 CCCAGTTTGAGCTGTCTTTTAGTCATTGCGCA-GTAGTCCTTCAAGCGGTCAGGGCTGGG 145 || ||||||||||||||||||||||| | | ||| |||| || || ||||||||||| Sbjct 319 CCGAGTTTGAGCTGTCTTTTAGTCATGTCCAACGTATTCCTGGAAACGTTCAGGGCTGGG 260 Query 146 TGGTGACGACGGCGGGTTGCAAGGCGGCCGCGAATGAAGGGTCAAACAACGTGGCGGCCG 205 | || ||||||| |||||||||| |||||||| || ||| |||| | |||| |||| Sbjct 259 TTCTGGCGACGGCTGGTTGCAAGGACGCCGCGAAGGAGTCGTCGAACAGCTTGGCTGCCG 200 Query 206 AGTAAGACTTGACCAGACCCAGGCCGGCAAAAAAGTCCACGGTCTTTTGCGCCTC 260 ||||||||||||||| ||| ||| || |||||||||||||||||||| || || Sbjct 199 GGTAAGACTTGACCAGTCCCTGGCTTGCGAAAAAGTCCACGGTCTTTTGTGCTTC 145 >seq4886 Length=579 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 1 CGACGTTGACGCTGGCATCGGCCGGCAATTGCGGGTCAAGCCACAGGTTATGG 53 |||||||||||||||||||| |||||||||||||||| ||||| || || ||| Sbjct 527 CGACGTTGACGCTGGCATCGACCGGCAATTGCGGGTCGAGCCATAGATTGTGG 579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735944571380