Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001589.1 Length=431 Score E Sequences producing significant alignments: (Bits) Value seq2322 443 5e-122 >seq2322 Length=7455 Score = 443 bits (490), Expect = 5e-122 Identities = 352/431 (82%), Gaps = 0/431 (0%) Strand=Plus/Minus Query 1 CGATAGCCATATCAAGAGCCTGCGCAGCAAGCTCAGGAGTGTGGCGGCGGATGCCGAGCC 60 ||| ||||| ||||| ||| ||||||||||| | | |||||| | || || ||||| Sbjct 3072 CGACAGCCACATCAAAAGCGTGCGCAGCAAGTTGCGCGCGGTGGCGCCCGAGGCGGAGCC 3013 Query 61 GATCCAGACCCATCGCGGCCTNNNNNNNNNNNNNNNNNNNNNNNNCAGCTGATGCGCCTT 120 |||||||||||||||||||| |||||||||||||| Sbjct 3012 CATCCAGACCCATCGCGGCCTTGGCTACAGCTACAGCCCGGGCAACAGCTGATGCGCCTG 2953 Query 121 GGGCTGCGGATTTTCCTGGTGTATGCGCTGTTTATCGGCCTGACCGGCTACTTCGTGCTC 180 ||| | ||| | |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 2952 GGGATCCGGTTCTTCCTGGTCTATGCGCTGTTTATCGGCCTGACCGGCTACTTCGTACTC 2893 Query 181 AACACCGTGATGAAGGAAATCCGCCCCGGCGTGCGCCAATCCACCGAAGAAACATTGGTG 240 | ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct 2892 AGCACCGTGATGAAGGAAATCCGCCCCGGTGTGCGCCAGTCCACCGAAGAAACCCTGGTG 2833 Query 241 GACACCGCCAACCTGCTGGCTGAAATCCTGCGTGCAGACGTTAAAAACGGCACCCTCGGC 300 |||||||||||||||||||| ||||||||||| || || || ||||||||||||||| Sbjct 2832 GACACCGCCAACCTGCTGGCGGAAATCCTGCGCAGCGATGTGAAGAACGGCACCCTCGGC 2773 Query 301 CAGAGCCATTGGCCCGAATTGCTCAAGGCTTATGGCAGTCGCCAGCCGGGAGCGACGATC 360 |||||||| ||||||||| |||||||||| || || || ||||| || |||| ||| Sbjct 2772 CAGAGCCACTGGCCCGAACTGCTCAAGGCCTACGGTGAGCGTCAGCCCGGCGCGAATATC 2713 Query 361 TGGGGCCTGCCGAAAAACCAGGTCAACCATCGCATCTACGTGACCGACGCCAAGGGCAGG 420 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 2712 TGGGGCCTGCCGAAAAACCAGGTCAACCACCGCATCTACGTCACCGACGCCAAGGGCATC 2653 Query 421 GTATTGCTCGA 431 || ||||| || Sbjct 2652 GTGTTGCTGGA 2642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1276700741568