Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20polycephalum_20[genbank_20GCA_5F900092265.1_202017- 01-02] 7,774 sequences; 48,621,035 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq1920 367 3e-99 >seq1920 Length=14951 Score = 367 bits (406), Expect = 3e-99 Identities = 242/268 (90%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 3 GACGAACTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGACTAC 62 ||||| ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||| Sbjct 1191 GACGAGCTGGCGCCGCACCATCTGAAGGTGCCGTCGGGCTCGTCGGTGCGGCTGGACTAC 1250 Query 63 AGCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACA 122 ||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||| || Sbjct 1251 AGCGAGCAGCCGCCGATTCTGGCGGTGCGCTTGCAGGAATTGTTCGGGCTGGCGGATACG 1310 Query 123 CCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGG 182 ||||| |||||||||||||| |||||||||||| |||||||| |||| ||| | | || Sbjct 1311 CCGCGGATTGCCGGCGGGCGGCAGGTGGTCAAGCTGCACCTGTTGTCACCGGCCAGACGG 1370 Query 183 CCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAG 242 || ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 1371 CCCGTGCAGGTGACGCAGGACCTGGCGAACTTCTGGCGCAGTACTTACGCCGAGGTGAAG 1430 Query 243 AAGGATCTGAAGGGGCGGTATCCGAAGC 270 |||||| ||||||||||||||||||||| Sbjct 1431 AAGGATTTGAAGGGGCGGTATCCGAAGC 1458 Score = 75.2 bits (82), Expect = 2e-11 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 267 AAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAAGCGACGGCGCGGATCAAACCCCGT 326 |||||||| |||||||||||||||||| | || ||| |||| || |||||||| || | Sbjct 10431 AAGCATTACTGGCCGGATGATCCGTTGATTGCTGAACCGACTGCCCGGATCAAGCCGAGA 10490 Query 327 AAGTAGCAACGACGGAGATCAACTGTGGG 355 ||||| || || ||||| | |||||| Sbjct 10491 AAGTAAGTACATCGCAGATCTAATGTGGG 10519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033519647936